Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03056 ATGCTGCTCCTAAAGGAATGCGATATCAACACGACAAAGAAGTTGGAGCACTTAGAACTTTCCAAAAGGAAGTTATTGGGAGATGAATTAGATACATGTGCTATTGACGAATTGCAAAAGATTGAAAATCAACTTGAACGCAGCTTAAGCAAAATTAGGGCAAGAAAGGATCAACTGTTCAAGGAACAAATTGAAAAGCTAAGAGAGAAGGAAAGGCACTTGGTTGAAGAAAATAGACGCTTATGTGAGCAGTATGGAATCGAACTTGTAACGGAGAGTCTGGAAGGCGAGGAGGAGGTGGAGACTGAGTTATTCATAGGGCGACCTGAGAAACGAATGCATTGA 345 0.4087 MLLLKECDINTTKKLEHLELSKRKLLGDELDTCAIDELQKIENQLERSLSKIRARKDQLFKEQIEKLREKERHLVEENRRLCEQYGIELVTESLEGEEEVETELFIGRPEKRMH 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03056 114 Pfam K-box region 12 84 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre16g03056 114 Coils Coil 35 84 - -
Trre16g03056 114 ProSiteProfiles K-box domain profile. 1 93 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03056 Trre-Chr16 26297669 26298694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03056 12 112 MADS-box Gene Family AT4G22950 51.754 2.12e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03056 - - psat:127074094 147.902