Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03052 ATGAAAACAAGCAAATATGTTTCAAAGCCTACCCTTTTGCTCAAGGACTATCTCAGGGATGACCTGAGCTCATGTTCATCGAGCAGTTTCAAATCGTTCCCACGAAGACAATGCTGCACCACCGTCGGATTCCTACTAGAAAAAGATCTCCAAATCAAACGCAACAAGAAGAAAACGCCACTTCCTCGACAACGGCCCACCGTAAATGCTCTGCAGAGAGCTTCCGGAGCAGTTATAACTGCCATCAAATCACTGTCCTCCTCACAAAAGAAAGCTTCTTCCGGTGTTCTTTCTAGAAGCTTCTCGAGGAAGCTGTTAAGCAGAAGGTTTTGGAGAAAAGCGGCGAAGGAACAGGGAAACGAAGGTGTACTGAGGTGTAGGAGATCATTCCGGGAACTACTTATGCAGGAAAGAGACTATAAACCGACGTCGTTTAGTGAGGATACTATATTTGCTGCCAAAAGCATCACCAGCGTTTCGTCTGGTTGTTGCAGTAACAGCTGGGGAGAAAGTGAATTTACGTTTTCATCAAACGCTACTTCTTCCGATAGCTCCACCGAACATGACTTAGTTGATGGCGGCAAAGACGACGGGGCTCCGCCTCAGCACAAGATAGAAGGATTAACACATGGGGATTGGTCAAATGAGAAGGAGCAATTCAGTCCTGTATCAATACTAGATTGCCCATTCCAAGATGAGGAAGAGATTAAGTCTCATTCCATGATCAATTCTTTCTTCCAAGGAGCAGAAAACAAGCATATGCAGAAGACGCGACATTTTGAGAATGTAGCGGCTTCACTCGAGCCATTAGTTTTAGAGAAAAGGATCCAATGCTTAGAACTAGAAGGTGAACCAAACAACAAAGCTACAAAACAATGTTCAGAATTACAGTCAATTATTCGAAATAACAACGAAGACGAGAATGAGCTAAACATTCTCAAGCTTGTCAAGAATTCAATTCCATCCAACAGTTTGATGATTAACACAGAGAAACTACTGTTTGATTACTTAGAACAGTCCATTGAGGAAAATAACAAAGTTAATAATTATTCAAAGAAGCTTAACCTTTGCAATGTAGTAGAGGATTGGATACAAGGACAACCTCAAGAACCATATTTGGGTTGGGAAGTGAAAGAAGGAAGACATGTTTACATTAGTGAGATGGAAAAAAGTGGAGACTGGAAAAACTCTGATCAAGAAACAGAACAACTTGTTCTTGAGCTGGAAAATGAGGTATTAGCTAGTTTGGTTGAAGAGATTGTTCTTGATCTTCTGTGA 1278 0.4147 MKTSKYVSKPTLLLKDYLRDDLSSCSSSSFKSFPRRQCCTTVGFLLEKDLQIKRNKKKTPLPRQRPTVNALQRASGAVITAIKSLSSSQKKASSGVLSRSFSRKLLSRRFWRKAAKEQGNEGVLRCRRSFRELLMQERDYKPTSFSEDTIFAAKSITSVSSGCCSNSWGESEFTFSSNATSSDSSTEHDLVDGGKDDGAPPQHKIEGLTHGDWSNEKEQFSPVSILDCPFQDEEEIKSHSMINSFFQGAENKHMQKTRHFENVAASLEPLVLEKRIQCLELEGEPNNKATKQCSELQSIIRNNNEDENELNILKLVKNSIPSNSLMINTEKLLFDYLEQSIEENNKVNNYSKKLNLCNVVEDWIQGQPQEPYLGWEVKEGRHVYISEMEKSGDWKNSDQETEQLVLELENEVLASLVEEIVLDLL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03052 425 PANTHER OS04G0572500 PROTEIN 9 424 - -
Trre16g03052 425 MobiDBLite consensus disorder prediction 176 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03052 Trre-Chr16 26244083 26247215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03052 1 424 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 31.667 1.65e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03052 - - tpra:123887284 612.838