Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03027 ATGGCGACGACGAGGTCACCCAACCGTTCATCTGACGAAACGGCGGATCCGACGCCGTTAATAGGAAGTTCGTCCGATGAGTCAAACTCCGGACGGAGAATTCTCCGTGCACCGAGTCTCCAACAAGCGGCGCGGTTTCTGAGACAAGCGAGTGGGCGGAGGTTGATGCGTGAGCCGTCGATGATGGTGAGGGAAACGGCGGCGGAACAATTGGAAGAGAGACAAAGCGATTGGGCTTATTCAAAGCCGGTTGTGATTCTTGATATTCTGTGGAATTTTGCGTTTATTGTTGCGGCTGTTGTTGTGTTGATTTTGAGTCGGGATGAGTCTCCTAGTTCGCCTCTTAGGTTGTGGATTTCAGGATATGCTTTACAGTGTGTTGTTCATGTTGTGTGTGTTTGTTTGGAGTTTCGGAGACGGATGCAGGTGCGGGAACAGTTGATTATCAATGGTGGTAACGCGGCTGGGGGCGGTGGCGGTGGAGGTGGCAGTGGGGAATTGATCTTTGATTCAATGGATGTTTCTGGACAGTATGTCAATTTGGAACAGAATGGGGACTATGGTTCTACAAGGTGA 576 0.5052 MATTRSPNRSSDETADPTPLIGSSSDESNSGRRILRAPSLQQAARFLRQASGRRLMREPSMMVRETAAEQLEERQSDWAYSKPVVILDILWNFAFIVAAVVVLILSRDESPSSPLRLWISGYALQCVVHVVCVCLEFRRRMQVREQLIINGGNAAGGGGGGGGSGELIFDSMDVSGQYVNLEQNGDYGSTR 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03027 191 PANTHER TARGET OF ERK KINASE MPK-1 51 144 - -
Trre16g03027 191 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03027 Trre-Chr16 26009909 26010484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03027 44 140 C3H Transcription Factor Family AT1G68070 59.794 1.87e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03027 - - gmx:100779757 235.728