Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03021 ATGGAAAATCACATAAACAGAGAACTCGATCTTCTCCCACCACCGCGAACCGATTCATCCCTCCTCCGTCTCCGATCATCCTCATCGTCGAAATCCGAACGCGGCGGTCCCTCACTCGACCTACAGCTCTCAATCAGCGTCGGTCCACCATCGATGCTGATGTGCGATGGCATAGAGTCTTTAAAATGGGAAGCGTCGGAGCAAATCCGCCTCGCGGCGATGGAAAAGGCGTACGCTGAGAGAGTAAGGGAGTTAACACGAAGAGAGATGGAAATGGCGCAATCGGAGTTCGCACGTGCGAGACAAATGTGGGAGCGTGCGAGAGAAGAAGTTGAAAGAGCTGAAAGAATCAAAGAAAGAGCAACAAGACAGGTTGATTCAAGTTGTATGGAAATTACCTGTCATTCTTGTAGGCAGAGATTCAGACCTGCTTCTGCTTGA 441 0.5011 MENHINRELDLLPPPRTDSSLLRLRSSSSSKSERGGPSLDLQLSISVGPPSMLMCDGIESLKWEASEQIRLAAMEKAYAERVRELTRREMEMAQSEFARARQMWERAREEVERAERIKERATRQVDSSCMEITCHSCRQRFRPASA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03021 146 MobiDBLite consensus disorder prediction 1 42 - -
Trre16g03021 146 PANTHER OS03G0310200 PROTEIN 26 143 - -
Trre16g03021 146 MobiDBLite consensus disorder prediction 20 39 - -
Trre16g03021 146 Coils Coil 83 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03021 Trre-Chr16 25961373 25961813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03021 42 142 C2H2 Transcription Factor Family AT2G01940 35.577 8.85e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03021 - - var:108340281 191.045