Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03016 ATGTCATCATTCATTCATCATGCGTTAGTGTCACTTCTTATTTGTGTTTTGTGGCAAGAACCTATCATAGCTATCAAACAGGCCTATATTGTTTACTTAGGATCACATTCTTTTGGTCCAAATCCTTCATCATTTGATATTGAATCTGCCACAAACTCTCACTATGATTTACTTGGATCTTACCTTGGAAGCATTGAGAAGGCCAAAGAAGCAATATTTTATTCCTACAATAAAAATATTAATGGCTTTGCTGCAATACTTGATGAAGATGAAGCTGCAAAGATTGCAAAAAATCCTAATGTAATATCAATTTTCTTGAATAAAAAACACAAACTTCAAACTACGCATTCATGGAATTTCCTTCAGTTAGAGAGTAATGGTGAAATTCCAAAGGATTCAATATGGAAGAGATCGTTTGGTGAAGACATCATCATTGCAAATTTAGATACTGGTGTTTGGCCTGAATCCAAGAGTTTTAGTGACGAAGGAATGGGACCAATTCCAAAAAAATGGCGTGGGATTTGTCAAGTTGATAACCAGAATCAAGATAAATTTTATTGCAATAGGAAGCTTATTGGAGCAAGATATTTTTACAAAGGTTATGGTAAAGATCACCAAAATGAATCATTTAATAGTGCACGTGATTTTGAAGGTCATGGTTCACATACTTTATCAACTGCTGGAGGAAGTTTTGTTGCAAATGCAAATGTATTTGGTTATGGCAACGGAACAGTAAGTGGTGGATCGCCAAAAGCACGAGTTGTATCTTATAAGGTTTGTTGGTCACCCGACACTGGATGTTATGATGCAGACATTTTGGCTGCTTTTGAAGCTTCCATAAGTGATGGTGTTGATGTGCTTTCGATTTCTTTAGGAAGTAATCAAGTAGAATATTATGAAACTGGTCAATCTATAGGGTCGTTTCATGCAGTTGCTAATGGCATTACTGTAGTGAGTGCTGCTACAAATTATGGACCTTATCTTAGCTCTGTTGGCAACTTGGAACCATGGGTGTTCACAGTTGCTGCAAGTACTATTGATAGAGAGTTTAATAGTTTTGTTACCCTTGGTAACAACAAAACACTCAAGGGTGCTAGCTTTTCAGAGATGGAATTGCAACCTCATAAGATGTATCCATTGATAAGTGGTGCTGATGCCAAATATGATAATGCATCATCCAAAGATGCGCTTAATTGCACTGGTGGAACTCTTGATCCAAGAAAGGCTAATGGGAAAATATTGTTTTGTCTTCAAAGTCAAGATGATTGTCACTTTTCATGTAGAATTCACAAGGGTGTTGAAGCTGCTCGTGTAGGTGCTGTTGCAATGATTTTGGCTAATGATGAGAATTCAGGGAGTGGAATTCAAGCTGACCCTCATGTGCTTCCTTCTTCATATGTTAACTTTATAGATGGCAGTTACATTTTTAATTACATTAACCACACCAAGTCTCCTATGGCTTCCATTTCTAAAGTGGTAACACAAATGGCTACAAAGCCAGCTCCTTTTATAGCTTTCTTTTCAGCAAGAGGACCAAATCCCGTTGAGCCAACAATCCTCAAGCCTGACATCACAGCACCAGGGGTCAACATAATTGCTGCTTATAGTGAAGCTATATCTCCCTCAGAACAAGCATCTGATAAACGTAGAACACCTTTCAATGTTATGTCAGGAACATCAATGTCGTGTCCTCACGTTGCTGGCCTTGTTGGGCTGCTTAAATCTATTCATCCTGATTGGAGTCCGGCCGCTATTAAGTCAGCAATCATGACAACAGCAACAACGGAAGACAACACTGGAGGACCTATATTGGATTCGTCACTAGAAAAGGCAACTCCATTTGACTACGGTGCAGGACATGTTCAACCTAATCGTGCGGTGGACCCTGGACTAGTATATGACCTAAATGTTACTGATTATATGAACTTTCTGTGTGCTTGTGGCTACAACAGCTCTATGCTTAAGTTGTTCTACGGGAAGCCTTACACTTGTCCAAAGTCCTTCAATTTGAAGGATTTCAATTATCCGGCTATCACAATTCTAGACTTTAAAGTAGGACAATCTATAAATGTTACTCGTACTCTTACCAACGTGGGATCTCCAAGCAAATATACAGTGAACATTCAAGCTCCCCCGGAATTTGTAGTTTCTATTGAGCCTAAGGTACTGAGCTTTAATCAAAGGGGTGAAAAAAAAGAGTTCAGAGTTACATTAAGCTTCAGCCCAAAAAGTAAGGGCAAGTCTGATTATGTCTTTGGAAGGTTAATTTGGACTAATGGGATGAACAATGTTGGGATACCTATTGCACTTAACTATCCACATTAG 2325 0.3854 MSSFIHHALVSLLICVLWQEPIIAIKQAYIVYLGSHSFGPNPSSFDIESATNSHYDLLGSYLGSIEKAKEAIFYSYNKNINGFAAILDEDEAAKIAKNPNVISIFLNKKHKLQTTHSWNFLQLESNGEIPKDSIWKRSFGEDIIIANLDTGVWPESKSFSDEGMGPIPKKWRGICQVDNQNQDKFYCNRKLIGARYFYKGYGKDHQNESFNSARDFEGHGSHTLSTAGGSFVANANVFGYGNGTVSGGSPKARVVSYKVCWSPDTGCYDADILAAFEASISDGVDVLSISLGSNQVEYYETGQSIGSFHAVANGITVVSAATNYGPYLSSVGNLEPWVFTVAASTIDREFNSFVTLGNNKTLKGASFSEMELQPHKMYPLISGADAKYDNASSKDALNCTGGTLDPRKANGKILFCLQSQDDCHFSCRIHKGVEAARVGAVAMILANDENSGSGIQADPHVLPSSYVNFIDGSYIFNYINHTKSPMASISKVVTQMATKPAPFIAFFSARGPNPVEPTILKPDITAPGVNIIAAYSEAISPSEQASDKRRTPFNVMSGTSMSCPHVAGLVGLLKSIHPDWSPAAIKSAIMTTATTEDNTGGPILDSSLEKATPFDYGAGHVQPNRAVDPGLVYDLNVTDYMNFLCACGYNSSMLKLFYGKPYTCPKSFNLKDFNYPAITILDFKVGQSINVTRTLTNVGSPSKYTVNIQAPPEFVVSIEPKVLSFNQRGEKKEFRVTLSFSPKSKGKSDYVFGRLIWTNGMNNVGIPIALNYPH 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03016 774 ProSiteProfiles Serine proteases, subtilase domain profile. 117 627 - -
Trre16g03016 774 FunFam Subtilisin-like protease SBT1.5 644 773 - -
Trre16g03016 774 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Trre16g03016 774 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Trre16g03016 774 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Trre16g03016 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 769 IPR045051 -
Trre16g03016 774 Pfam Subtilase family 140 601 IPR000209 GO:0006508|GO:0008236
Trre16g03016 774 FunFam Subtilisin-like protease SBT5.3 19 113 - -
Trre16g03016 774 Gene3D Peptidase S8/S53 domain 142 640 IPR036852 GO:0004252|GO:0006508
Trre16g03016 774 Gene3D - 347 497 - -
Trre16g03016 774 FunFam Subtilisin-like protease SBT1.5 142 370 - -
Trre16g03016 774 FunFam subtilisin-like protease SBT1.5 347 496 - -
Trre16g03016 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Trre16g03016 774 Pfam Peptidase inhibitor I9 29 112 IPR010259 -
Trre16g03016 774 CDD PA_subtilisin_like 354 489 - -
Trre16g03016 774 Pfam Fibronectin type-III domain 672 769 IPR041469 -
Trre16g03016 774 CDD Peptidases_S8_3 110 594 IPR034197 -
Trre16g03016 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 113 IPR037045 -
Trre16g03016 774 SUPERFAMILY Subtilisin-like 112 631 IPR036852 GO:0004252|GO:0006508
Trre16g03016 774 Gene3D - 644 772 - -
Trre16g03016 774 Pfam PA domain 385 473 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03016 Trre-Chr16 25904539 25909705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03016 16 771 Subtilisin-like Serine Gene Family AT5G59810 55.570 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03016 - - vun:114175516 994.186