Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03015 ATGTCATCATCATCCATTTTTCATGTGTTAATAACACTTCTTCTTTTTGTTTTGATGCATGAACCTTCCCTTGCAATTAAACAGTCCTATATTGTATACTTAGGATCACATTCTTTTGGTCCAAGTCCTTCACTATTTGATTTGGAATCTGTCACAAACTCTCACTATGATCTGCTTGGATCTTACCTTGGAAGTACCGAAAAGGCCAAAGAATCAATATTTTACTCTTACAATAAAAATATTAATGGATTTGCTGCAATACTTGATGAAGATGAAGCAGCCGAGATTGCAAAGCACCCAAGTGTGATATCGATTTTCTTAAATAAAAAATATGAACTACATACAACTCGTTCGTGGGAATTTCTTGGGTTAGAGAGAGGTGGTGGATTTCCAGAAGATTCATTGTGGAAGAAAACACTGGGCAAAGATATTATTATCGGAAATTTAGACACTGGTGTTTGGCCAGAATCTAAAAGTTTCAGCGATGAAGGATTGGGGCCAATTCCAAAAAAATGGCGTGGAATCTGTCAAGTTACCAAAGGAAATAAAGATAATTTTCACTGCAACAGGAAGCTTATTGGAGCAAGATATTTTTATAAAGGCTATGAAGCAGAACATGGTAAAGAGATAAAAAATGTAACATTTAATAGTGCACGCGACTTTGATGGTCATGGTTCACATACCTTATCAACTGCCGGAGGTAATTTTGTTGCCGGAGCTAGTGTATTTGGCATGGGAAATGGAACAGCAAGTGGTGGATCGCCGAAAGCAAGAGTTGCATCCTATAAAGTTTGTTGGGAAGACTGTTATGACTCAGATATTTTGGCTGGTATTGAGCATGCAATAAGTGATGGTGTTGATGTTCTTTCTTTGTCTTTGGGTGGTGCTTCTCAAGAATATTTCAAAAGCAGTCTTTCCATAGGCTCTTTCCATGCAATTGCTAACAACATTATTGTAGTAGCTTCTGGAGGTAATTCAGGACCTAGTCCTTCCACTGTAGCAAACTTGGAACCATGGGTTCTCACAGTTGCTGCTAGCACAATTGATAGAAACTTTGCAAGTTATGTTGTTCTTGGTAACAAGCAAGTACTCAAGGGAGAAAGTCTTTCGGAGATTCACTTACCTGCTCATAAGTCGTACCCATTAATAAGTGCTGCTGATGCGAAAGCTGATGGTGTATCTGCCATAGATGCCCTTTTTTGCAAGGAAGGAGCTCTTGATCCTCATAAGGCAAAGGGAAAAATATTGGTATGTCTTCGAGGTGGTGAAACTAGTAGAGTTGACAAGGGTGTGCAAGCTTCTCGTGTAGGCGCAGTTGGAATGATTTTGACGAATGATGAGGAATCAGCTGGCGAAGTTATAGCCGATCCTCATGTCCTTCCTGCTACACATGTTAACTTTACAGAAGGAAGTTACATTTTTAATTATATCAATAACACCAAGTCTCCTATGGCTTACATTACTGGAGTTAAAACACAATTGGGTGTAAAGGGAACTCCATCTATGGCTGCATTTTCATCAAGAGGCCCAAATACTCTTGAGCCTACAATTCTCAAGCCTGACATCACTGCACCGGGCGTCAACATAATTGCAGCTTATAGTGAAGCTGCACCTCCTTCAGAAAATGAATTCGATAAACGAAGAACTCCTTTTATTACTCTTTCAGGCACTTCAATGTCATGTCCTCATGTTGCCGGACTTGTTGGACTTCTTAAATCTCTTCATCCCAATTGGAGTCCAGCTGCTATCAAGTCCGCGATCATGACCACGGCAACAACAAAAGACAACATTGGAGAGCATTTACTTGATTCACTAGAAAAAGCAACTCCTTTTGCCTATGGTGCCGGACATGTTCGACCTAATCATGCTGCAGATCCTGGACTAGTTTATGACCTAAACATTACCGATCATTTGAACTTTTTATGTGGTCGTGGATACAATAGTAGCCAACTTAAACCATTCTACGGAAAACCATATACTTGTCCAAAATCGTTCAATTTGCTAGATTACAATTATCCAACCATTACAGTTCCTTACTTGAAAATCGGACAGCCTTTGACTGTTACGCGTACAGTAACCAATGTCGGATCGCCTAGTAAGTATATAGTGCGCATCGAGGCACCCTCGGAATTACTAGTTTCAGTGGAGCCTAAGAGACTAATCTTTAAGGAAAAGGGTGAGAAAAGAGAGTTCAAGGTTACATTAACTTTGAAGCAACAAAGTAAGTATAAGACTGAATATGTCTTTGGAAAATTGATTTGGACCAATGGAAAACATCGTGTTGGGAGTCCTATTGTAATAAAGTCTCCACAATAG 2316 0.3951 MSSSSIFHVLITLLLFVLMHEPSLAIKQSYIVYLGSHSFGPSPSLFDLESVTNSHYDLLGSYLGSTEKAKESIFYSYNKNINGFAAILDEDEAAEIAKHPSVISIFLNKKYELHTTRSWEFLGLERGGGFPEDSLWKKTLGKDIIIGNLDTGVWPESKSFSDEGLGPIPKKWRGICQVTKGNKDNFHCNRKLIGARYFYKGYEAEHGKEIKNVTFNSARDFDGHGSHTLSTAGGNFVAGASVFGMGNGTASGGSPKARVASYKVCWEDCYDSDILAGIEHAISDGVDVLSLSLGGASQEYFKSSLSIGSFHAIANNIIVVASGGNSGPSPSTVANLEPWVLTVAASTIDRNFASYVVLGNKQVLKGESLSEIHLPAHKSYPLISAADAKADGVSAIDALFCKEGALDPHKAKGKILVCLRGGETSRVDKGVQASRVGAVGMILTNDEESAGEVIADPHVLPATHVNFTEGSYIFNYINNTKSPMAYITGVKTQLGVKGTPSMAAFSSRGPNTLEPTILKPDITAPGVNIIAAYSEAAPPSENEFDKRRTPFITLSGTSMSCPHVAGLVGLLKSLHPNWSPAAIKSAIMTTATTKDNIGEHLLDSLEKATPFAYGAGHVRPNHAADPGLVYDLNITDHLNFLCGRGYNSSQLKPFYGKPYTCPKSFNLLDYNYPTITVPYLKIGQPLTVTRTVTNVGSPSKYIVRIEAPSELLVSVEPKRLIFKEKGEKREFKVTLTLKQQSKYKTEYVFGKLIWTNGKHRVGSPIVIKSPQ 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03015 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Trre16g03015 771 FunFam subtilisin-like protease SBT1.5 349 494 - -
Trre16g03015 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 114 IPR037045 -
Trre16g03015 771 FunFam Subtilisin-like protease SBT1.5 143 365 - -
Trre16g03015 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 766 IPR045051 -
Trre16g03015 771 Pfam Fibronectin type-III domain 669 767 IPR041469 -
Trre16g03015 771 CDD PA_subtilisin_like 355 487 - -
Trre16g03015 771 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Trre16g03015 771 Gene3D - 641 770 - -
Trre16g03015 771 CDD Peptidases_S8_3 111 592 IPR034197 -
Trre16g03015 771 SUPERFAMILY Subtilisin-like 113 628 IPR036852 GO:0004252|GO:0006508
Trre16g03015 771 FunFam Subtilisin-like protease SBT5.3 19 114 - -
Trre16g03015 771 SUPERFAMILY PA domain 403 481 IPR046450 -
Trre16g03015 771 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Trre16g03015 771 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Trre16g03015 771 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Trre16g03015 771 Pfam Subtilase family 141 615 IPR000209 GO:0006508|GO:0008236
Trre16g03015 771 FunFam Subtilisin-like protease SBT1.5 641 770 - -
Trre16g03015 771 Gene3D Peptidase S8/S53 domain 143 636 IPR036852 GO:0004252|GO:0006508
Trre16g03015 771 Gene3D - 349 494 - -
Trre16g03015 771 Pfam PA domain 400 471 IPR003137 -
Trre16g03015 771 ProSiteProfiles Serine proteases, subtilase domain profile. 118 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03015 Trre-Chr16 25892439 25896678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03015 18 768 Subtilisin-like Serine Gene Family AT5G59810 56.653 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03015 - - psat:127074066 1051.97