Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03014 ATGTCATCATCATCCATTTTTCATGTGTTAATAACACTTCTTCTTTTTGTTTTGATGCATGAACCTTCCCTTGCAATTAAACAGGCAAGCATTGTCTCACGATCACATTCTTTTGGTCCAAGTCCTTCACTATTTGATTTGGAATCTGTCACAAACTCTCACTATGATCTGCTTGGATCTTACCTTGGAAGTACCGAAAAGGCCAAAGAATCAATATTTTACTCTTACAATAAAAATATTAATGGATTTGCTGCAATACTTGATGAAGATGAAGCAGCCGAGATTGCAAAGCACCCAAGTGTGATATCGATTTTCTTAAATAAAAAATATGAACTACATACAACTCGTTCGTGGGAATTTCTTGGGTTAGAGAGAGGTGGTGGATTTCCAGAAGATTCATTGTGGAAGAAAACACTGGGCAAAGATATTATTATCGGAAATTTAGACACTGGTGTTTGGCCAGAATCTAAAAGTTTCAGCGATGAAGGATTGGGGCCAATTCCAAAAAAATGGCGTGGAATCTGTCAAGTTACCAAAGGAAATAAAGATAATTTTCACTGCAACAGGAAGCTTATTGGAGCAAGATATTTTTATAAAGGCTATGAAGCAGAACATGGTAAAGAGATAAAAAATGTAACATTTAATAGTGCACGCGACTTTGATGGTCATGGTTCACATACCTTATCAACTGCCGGAGGTAATTTTGTTGCCGGAGCTAGTGTATTTGGCATGGGAAATGGAACAGCAAGTGGTGGATCGCCGAAAGCAAGAGTTGCATCCTATAAAGTTTGTTGGGAAGACTGTTATGACTCAGATATTTTGGCTGGTATTGAGCATGCAATAAGTGATGGTGTTGATGTTCTTTCTTTGTCTTTGGGTGGTGCTTCTCAAGAATATTTCAAAAGCAGTCTTTCCATAGGCTCTTTCCATGCAATTGCTAACAACATTATTGTAGTAGCTTCTGGAGGTAATTCAGGACCTAGTCCTTCCACTGTAGCAAACTTGGAACCATGGGTTCTCACAGTTGCTGCTAGCACAATTGATAGAAACTTTGCAAGTTATGTTGTTCTTGGTAACAAGCAAGTACTCAAGGGAGAAAGTCTTTCGGAGATTCACTTACCTGCTCATAAGTCGTACCCATTAATAAGTGCTGCTGATGCGAAAGCTGATGGTGTATCTGCCATAGATGCCCTTTTTTGCAAGGAAGGAGCTCTTGATCCTCATAAGGCAAAGGGAAAAATATTGGTATGTCTTCGAGGTGGTGAAACTAGTAGAGTTGACAAGGGTGTGCAAGCTTCTCGTGTAGGCGCAGTTGGAATGATTTTGACGAATGATGAGGAATCAGCTGGCGAAGTTATAGCCGATCCTCATGTCCTTCCTGCTACACATGTTAACTTTACAGAAGGAAGTTACATTTTTAATTATATCAATAACACCAAGTCTCCTATGGCTTACATTACTGGAGTTAAAACACAATTGGGTGTAAAGGGAACTCCATCTATGGCTGCATTTTCATCAAGAGGCCCAAATACTCTTGAGCCTACAATTCTCAAGCCTGACATCACTGCACCGGGCGTCAACATAATTGCAGCTTATAGTGAAGCTGCACCTCCTTCAGAAAATGAATTCGATAAACGAAGAACTCCTTTTATTACTCTTTCAGGCACTTCAATGTCATGTCCTCATGTTGCCGGACTTGTTGGACTTCTTAAATCTCTTCATCCCAATTGGAGTCCAGCTGCTATCAAGTCCGCGATCATGACCACGGCAACAACAAAAGACAACATTGGAGAGCATTTACTTGATTCACTAGAAAAAGCAACTCCTTTTGCCTATGGTGCCGGACATGTTCGACCTAATCATGCTGCAGATCCTGGACTAGTTTATGACCTAAACATTACCGATCATTTGAACTTTTTATGTGGTCGTGGATACAATAGTAGCCAACTTAAACCATTCTACGGAAAACCATATACTTGTCCAAAATCGTTCAATTTGCTAGATTACAATTATCCAACCATTACAGTTCCTTACTTGAAAATCGGACAGCCTTTGACTGTTACGCGTACAGTAACCAATGTCGGATCGCCTAGTAAGTATATAGTGCGCATCGAGGCACCCTCGGAATTACTAGTTTCAGTGGAGCCTAAGAGACTAATCTTTAAGGAAAAGGGTGAGAAAAGAGAGTTCAAGGTTACATTAACTTTGAAGCAACAAAGTAAGTATAAGACTGAATATGTCTTTGGAAAATTGATTTGGACCAATGGAAAACATCGTGTTGGGAGTCCTATTGTAATAAAGTCTCCACAATAG 2313 0.3969 MSSSSIFHVLITLLLFVLMHEPSLAIKQASIVSRSHSFGPSPSLFDLESVTNSHYDLLGSYLGSTEKAKESIFYSYNKNINGFAAILDEDEAAEIAKHPSVISIFLNKKYELHTTRSWEFLGLERGGGFPEDSLWKKTLGKDIIIGNLDTGVWPESKSFSDEGLGPIPKKWRGICQVTKGNKDNFHCNRKLIGARYFYKGYEAEHGKEIKNVTFNSARDFDGHGSHTLSTAGGNFVAGASVFGMGNGTASGGSPKARVASYKVCWEDCYDSDILAGIEHAISDGVDVLSLSLGGASQEYFKSSLSIGSFHAIANNIIVVASGGNSGPSPSTVANLEPWVLTVAASTIDRNFASYVVLGNKQVLKGESLSEIHLPAHKSYPLISAADAKADGVSAIDALFCKEGALDPHKAKGKILVCLRGGETSRVDKGVQASRVGAVGMILTNDEESAGEVIADPHVLPATHVNFTEGSYIFNYINNTKSPMAYITGVKTQLGVKGTPSMAAFSSRGPNTLEPTILKPDITAPGVNIIAAYSEAAPPSENEFDKRRTPFITLSGTSMSCPHVAGLVGLLKSLHPNWSPAAIKSAIMTTATTKDNIGEHLLDSLEKATPFAYGAGHVRPNHAADPGLVYDLNITDHLNFLCGRGYNSSQLKPFYGKPYTCPKSFNLLDYNYPTITVPYLKIGQPLTVTRTVTNVGSPSKYIVRIEAPSELLVSVEPKRLIFKEKGEKREFKVTLTLKQQSKYKTEYVFGKLIWTNGKHRVGSPIVIKSPQ 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03014 770 Pfam Fibronectin type-III domain 668 766 IPR041469 -
Trre16g03014 770 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Trre16g03014 770 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Trre16g03014 770 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Trre16g03014 770 Gene3D - 348 493 - -
Trre16g03014 770 Pfam Peptidase inhibitor I9 48 113 IPR010259 -
Trre16g03014 770 Gene3D Peptidase S8/S53 domain 142 635 IPR036852 GO:0004252|GO:0006508
Trre16g03014 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Trre16g03014 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 69 765 IPR045051 -
Trre16g03014 770 FunFam Subtilisin-like protease SBT1.5 142 364 - -
Trre16g03014 770 Gene3D - 640 769 - -
Trre16g03014 770 SUPERFAMILY PA domain 402 480 IPR046450 -
Trre16g03014 770 SUPERFAMILY Subtilisin-like 112 627 IPR036852 GO:0004252|GO:0006508
Trre16g03014 770 CDD PA_subtilisin_like 354 486 - -
Trre16g03014 770 Pfam PA domain 399 470 IPR003137 -
Trre16g03014 770 CDD Peptidases_S8_3 110 591 IPR034197 -
Trre16g03014 770 ProSiteProfiles Serine proteases, subtilase domain profile. 117 623 - -
Trre16g03014 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Trre16g03014 770 Pfam Subtilase family 140 614 IPR000209 GO:0006508|GO:0008236
Trre16g03014 770 FunFam Subtilisin-like protease SBT1.5 640 769 - -
Trre16g03014 770 FunFam Subtilisin-like protease SBT5.3 33 113 - -
Trre16g03014 770 FunFam subtilisin-like protease SBT1.5 348 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03014 Trre-Chr16 25892439 25896678 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03014 47 767 Subtilisin-like Serine Gene Family AT2G04160 56.164 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03014 - - psat:127074066 1034.63