Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03008 ATGTCTTCATCCATTTATCATACCTTATTGTTACTTCTCCTTTGCTTTCTTCTCCATAAACCCACCCAAGCAATCAAAAAGTCCTACATTGTATACTTAGGACCACAATCTTATGGTTCAAGTCTTTCAACTCTTGATGTTCAATCTGTCACAAACTTTCATTATAATTTGCTTAGCTCATACGTTGGAAGCACAAAGAAGGCCAAAGAAGCAATCTTTTATTCTTATAGTAAATATTTTAACGGATTCGCCGCAGTTCTTGATGAAGATGAAGCTGCAATGGTTTCAAAGCATCCTGATGTGGTATCAATTTTCTTAAACAAAGCAAGAGAACTTCACACAACTCACTCATGGGATTTTCTTGGATTAGAAAGAAATGTTATTCAAAAGAGTTCATTATGGAGCAAAACCAAAGGAGAAGATATCATTATTGGGAATCTAGATACCGGTGTTTGGCCCGAATCAAAGAGCTTTAGTGATGAAGGGATGGGTCCGGTTCCAACTAGGTGGCGAGGAATTTGCGATGTTGACAAAAATAATACGGATAAATTTCATTGCAACAGGTAA 567 0.3668 MSSSIYHTLLLLLLCFLLHKPTQAIKKSYIVYLGPQSYGSSLSTLDVQSVTNFHYNLLSSYVGSTKKAKEAIFYSYSKYFNGFAAVLDEDEAAMVSKHPDVVSIFLNKARELHTTHSWDFLGLERNVIQKSSLWSKTKGEDIIIGNLDTGVWPESKSFSDEGMGPVPTRWRGICDVDKNNTDKFHCNR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03008 188 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Trre16g03008 188 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 46 188 IPR045051 -
Trre16g03008 188 SUPERFAMILY Subtilisin-like 8 160 IPR036852 GO:0004252|GO:0006508
Trre16g03008 188 Gene3D Peptidase S8/S53 domain 114 188 IPR036852 GO:0004252|GO:0006508
Trre16g03008 188 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 113 IPR037045 -
Trre16g03008 188 FunFam Subtilisin-like protease SBT5.3 18 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03008 Trre-Chr16 25875048 25877078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03008 17 188 Subtilisin-like Serine Gene Family AT5G59810 58.046 2.66e-62 204