Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02961 ATGAAGAAGGTGACAGTAATTGTGTCCATTTTTCTGTTCTCAGTACTCTCTTTTCAACAATCCCTACACGTTTCATCCTCGCCTCTCTTACACCAAAATCAGGTTTACGAGGAATCGTCTGATGGAAGAAATCAAAAACAGGAGCAAGAGCGTGCTCCTGAAGTGCGTTGCTCCAGAGAGAGAAGTAGGGCTGCTTGGAAAATAATAGAGGAGTATTTGACACCATTTGTGGAGAAAGAAAACTATCAGTTGTCAAGAAAGTGCAGACTTCATTTTGAGAATGATATGTTTAGGGATCAAGAAGAGCATAAAATTTACCTTGACAGGAATGAATGGCAGTGTGGATATTGCAAGAAAAGCTTCCGTGAAGAAAAATTTATTGATCAGCATTTAGATAACAGGCACTACAATCTTCTGGATCTGAGTCATGGAAAATGCTTGGCTGATCTATGTGGGGCATTGCATTGTGATGCTGTAATGAATTCCAAGTCCTCTAGAAGCAAGTGTAATCCAGCAGCTGCTGCAAGAAACCGTCACCTATGTGAGAGTCTTGCTGACAATTGTTTTCCTATAAGCGAGGGTCCATCAGCGAGCCGTCTTCACGAATTGTTTCTGCACCAATTTTGTGATGCTCACATCTGCTCAGGGAAACATAAACCCTTCTCTAGAGGAGGCAAGGATCAAGGAAGTTTCTTTCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTCTTTCTTTATTTGATACAGAGTGATATGAAGGGTCGAAATCAAGAGCTTCGTCGCATCTCCAAAGCTGGATGGAAAGTAAAGCCATCATGA 837 0.4217 MKKVTVIVSIFLFSVLSFQQSLHVSSSPLLHQNQVYEESSDGRNQKQEQERAPEVRCSRERSRAAWKIIEEYLTPFVEKENYQLSRKCRLHFENDMFRDQEEHKIYLDRNEWQCGYCKKSFREEKFIDQHLDNRHYNLLDLSHGKCLADLCGALHCDAVMNSKSSRSKCNPAAAARNRHLCESLADNCFPISEGPSASRLHELFLHQFCDAHICSGKHKPFSRGGKDQGSFFRLAAGALILVLLPVFYLFLYLIQSDMKGRNQELRRISKAGWKVKPS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02961 278 MobiDBLite consensus disorder prediction 35 54 - -
Trre16g02961 278 ProSitePatterns Zinc finger C2H2 type domain signature. 114 135 IPR013087 -
Trre16g02961 278 PANTHER ZINC FINGER PROTEIN-RELATED 7 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02961 Trre-Chr16 25417710 25421212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02961 33 278 C2H2 Transcription Factor Family AT5G63280 60.484 1.12e-106 309