Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02917 ATGGCTCTTAAAAAATGGTCACATGAACAAATTATAGGAGCTTTTTGTTCTCCCTTTTGTCTATCTCTTTTTTTCCTTGCAAGTGTGTTAATTGTGTTTAACTTTGCAATTAGAAAACCCAAATCTAAATCCAAAACAAATCTTAATCAACTTCCATTTCCACCTAAACTACCTATCATTGGTAATCTTCATCAACTAGGAACACTTCCACACCGTTCTCTTAGAGACCTATCACTTAAATATGGCAACATGATGTTGTTGCAATTGGGACAAAAACCAAATCCAACTCTAGTGGTTACATCAGCAGATGTAGCCATGGAAATCATGAAAAATCATGATAAGGTTTTTTCAAACCGACCCCAACATATAGCTCCAAAAATCTTGCTGTATGGATGTACCGAGGTTGGTTTTGGACTTTATGGAAAAATTTGGAAACAAAAAAGAAAATTATGTGTTGGAGAACTCTTAAACATGAAAAGTGTGCAATTATCTTATCCCATTAGAGAAGAAGAAGTTGAAGAGTTGGTGAATAAGCTACGAGAAGCTAGCTCGAATGATGAATGTGTAAATCTAACTGAAATGCTTATTTCAACAATAAACAATATTGTGTGTATATGTGCTCTTGGAAGGAAGTATGAAGAAGCTAGTGAAGGTAGTTTGAAAGTGTTAGCAAGAAAGGTTATGATTTATCTTCAAGCTTTTGTTGTTGGAGATTACTTCCCTTCTTTGAGTTGGATTGATGTTCTTAGTGGAAAAATTAGAGAAATTAAGGATACTTTTCAAGCACTTGATGGTTTCTTTGATCAAGTTATTGAAGAGCGTTTGGCTTTGAAGAAAATGGAAAATAATCAATTCAAGAAAAAGGGGTTTGTGGATATTCTACTTCAACTCCAAGAGGATGGCATGCTTGACTTTGAGTTCTCCAATAATGATATCAAAGGACTTCTAATGGACATGTTTGTTGGAGCAACTGACACAACCTCAGCAACATTAGAATGGACAATTTCAGAGCTGATGAGACATCCAACTGTAATGAAGAAAGTACAAGAAGAAGTAAGAAGAGTTGTTGGAAATAAATCAAAAGTTGAAGAAAATGACATCAATGAAATGCATTATTTAAAGTGTGTTGTGAAAGAAAGTCTAAGGTTACATCCAGCTACTCCTCTAATGGCTCCTAGAGAAACAATATCTAGTGTGAATCTAAATGGTTATGATATTCCTGAAAAAACAATGGTATTTGTAAATTCATGGGCAATACAAAGAGACCCTAAAAATTGGGAGAACCCTGAAGAGTTCATGCCAGAGAGATTTGAAAAGAGCATAGTTAATTTTATAGGTCAAGATTTTCAGTTTATTCCATTTGGTTTTGGAAGAAGGGGGTGTCCTGGAATGCATTTTGGAGTAACTACGGTTGAATATGTACTTGCTAGTCTTCTTTATTGGTTCAATTGGAAGCTACCAACCGAAACAAATTTAGGTAAACAAGATATAGATATGAATGAGGTATTTGGACTTGTTACCACAAAGAAAGAACCTCTTCACCTTAAACCAATAGCTTTTTCAGTTTAA 1569 0.3448 MALKKWSHEQIIGAFCSPFCLSLFFLASVLIVFNFAIRKPKSKSKTNLNQLPFPPKLPIIGNLHQLGTLPHRSLRDLSLKYGNMMLLQLGQKPNPTLVVTSADVAMEIMKNHDKVFSNRPQHIAPKILLYGCTEVGFGLYGKIWKQKRKLCVGELLNMKSVQLSYPIREEEVEELVNKLREASSNDECVNLTEMLISTINNIVCICALGRKYEEASEGSLKVLARKVMIYLQAFVVGDYFPSLSWIDVLSGKIREIKDTFQALDGFFDQVIEERLALKKMENNQFKKKGFVDILLQLQEDGMLDFEFSNNDIKGLLMDMFVGATDTTSATLEWTISELMRHPTVMKKVQEEVRRVVGNKSKVEENDINEMHYLKCVVKESLRLHPATPLMAPRETISSVNLNGYDIPEKTMVFVNSWAIQRDPKNWENPEEFMPERFEKSIVNFIGQDFQFIPFGFGRRGCPGMHFGVTTVEYVLASLLYWFNWKLPTETNLGKQDIDMNEVFGLVTTKKEPLHLKPIAFSV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02917 522 Pfam Cytochrome P450 52 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 FunFam Cytochrome P450 83B1 37 516 - -
Trre16g02917 522 Coils Coil 345 365 - -
Trre16g02917 522 Gene3D Cytochrome P450 35 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PANTHER CYTOCHROME P450 71B11-RELATED 31 517 - -
Trre16g02917 522 CDD CYP71-like 80 513 - -
Trre16g02917 522 SUPERFAMILY Cytochrome P450 46 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02917 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02917 Trre-Chr16 24966437 24969624 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02917 52 517 Cytochrome P450 AT3G26330 43.100 4.08e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02917 K20617 - gmx:100803384 683.33