Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02915 ATGCTACTAATAATCTCTTCCATATTTCTCATCCTTTTTATGCTATTAATAAAATGGTATTCCAATTCTACAAAAACCAAAAACTCACCTCCTTCTCCTCCAAAATTACCTATCATAGGAAATCTCCATCAACTTGGCCTATTCCCTCACCGTACACTTTATTCTTTAGCTAAAAAATATGGCCCTTTCATGCAACTTCATCTTGGCAGTGTACCATTTCTCGTGATCTCATCAGCTGATGCAGCACGTGAGATATTGAAAACACATGATCATGTTTTTGCAAACAGACCACAAAAGAAAAATTACAAAATACTTATATATGATTGCAAAGATGTTTCAACAGCTCCATATGGAGAATATTGGAGACAAATAAGAAGTATATCTGTTTTACATCTTCTTAGTGCTAAAAGTGTTCAATCTCTTCGCGCCGTGCGAGAGGATGAAGTGAGTTTAATGATGGAGAAAATAAAGCAATATTCTTCCATATCATTACCTTTGAATATAAGTGAATTAATCTCTACAACTACTAATGATATAGTTTGTAGGGTTGCCTTGGGAAGAAAGTATAGTGGTGAAAGTGGAAAGGGATTTAAGAAGTTGTTGATGGATTTTACAGAGTTACTTAGTGTTTTTATTGTTGGAGATTTTGTACCTTGGCTTGATTGGTTGACTCATGTTTCTGGAGTTTATGGAAGAGCTAAAAAAGTGGCTAAACAATTTGATGATCTTTTGGAAGATGTTGTTGAAGATCATATCAAACGTCAGAGAGGAACTAGTGAAGATTTTGGTGACTTTGTCGATGTTTTGCTTTGGATTCAAAAGACAGAATCAACTGGTTTTCCTATTGACAGAACAATCATAAAAGCTCTGTTATTGGACATGTTTATTGGAGGTACAGACACTGTATCAAGTTTGTTAGAGTGGGAATTGACAGAACTCATAAGACATCCAATTATCATGAAGAAATTGCAAGAAGAAGGAAGGAAGGTAGCTAATGGTAAAACACACATAAATGAAGATGATTTGATTAACATGAAATACCTAAAGGCAGTGGTTAAAGAAACACTACGATTACATCCTCCATTTTCGCTACTAGTCCCTCGACAAAGTAGACAAGATATCACACTAAACGGTTACGACATTAAAGCCGGCACACATGTTATTATCAATGCATGGGGAATTGCAAGAGATCCTACAAATTGGAATCAACCTGAAGAATTTAAGCCAGAGAGATTCTTGAATAATTCAATAGATATTAAAGGAAATGATTTTCAATTGATTCCATTTGGAGGTGGGAGAAGAGGTTGTCCTGGGATAGCATATGCTACGGCTGTCAATGAACTTGTGTTAGCCAACCTTGTGCATCAATTTAATTGGGAATTACCTGATGGTGCTGCAGGATTGGAGAATTTAGACATGTCTGAAACAATTGGGTTTATTGCACATAGAAATACTCCCCTAGTGGCACTTGCGGTTCCTAAATAA 1485 0.3582 MLLIISSIFLILFMLLIKWYSNSTKTKNSPPSPPKLPIIGNLHQLGLFPHRTLYSLAKKYGPFMQLHLGSVPFLVISSADAAREILKTHDHVFANRPQKKNYKILIYDCKDVSTAPYGEYWRQIRSISVLHLLSAKSVQSLRAVREDEVSLMMEKIKQYSSISLPLNISELISTTTNDIVCRVALGRKYSGESGKGFKKLLMDFTELLSVFIVGDFVPWLDWLTHVSGVYGRAKKVAKQFDDLLEDVVEDHIKRQRGTSEDFGDFVDVLLWIQKTESTGFPIDRTIIKALLLDMFIGGTDTVSSLLEWELTELIRHPIIMKKLQEEGRKVANGKTHINEDDLINMKYLKAVVKETLRLHPPFSLLVPRQSRQDITLNGYDIKAGTHVIINAWGIARDPTNWNQPEEFKPERFLNNSIDIKGNDFQLIPFGGGRRGCPGIAYATAVNELVLANLVHQFNWELPDGAAGLENLDMSETIGFIAHRNTPLVALAVPK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02915 494 Pfam Cytochrome P450 30 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 CDD CYP71-like 59 487 - -
Trre16g02915 494 Gene3D Cytochrome P450 20 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Trre16g02915 494 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02915 494 FunFam Cytochrome P450 83B1 16 490 - -
Trre16g02915 494 PANTHER CYTOCHROME P450 71B11-RELATED 12 492 - -
Trre16g02915 494 SUPERFAMILY Cytochrome P450 30 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02915 Trre-Chr16 24942315 24944588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02915 1 493 Cytochrome P450 AT3G48280 50.810 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02915 - - gmx:100819183 602.823