Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02914 ATGGCTCTCAAAATATGGTCACATGAACAAATTAAACTTGTTTTTTCTTCTCCAATTTGTCTATCATTTTTCTTCCTTGTAAGTGTGTTAATCGTATTTAATCTTGCAATCAAAAAACCTAAATCCAAAACTAATCTAAATAAGCTTCCATCTCCACCTAAATTACCAATAATAGGTAATCTTCATCAACTAGGCACACTTCCATTCCGTTCTCTTCGAGATCTATCACTCAAATATGGCAACATGATGTTGTTGCAATTGGGATGGAAAAAAGCTCTAGTGATTTCATCAGCAGAAGTAGCTTTGGAAATAATGAAAACTCACGATCTCGCATTTTCAAACCGAATCCAAAATACAACTACAAACATCGTATTTTATGGATGTACGGATGTTGGTTTTCAAAATTATGGAGAAAATTGGAGACAAAAAAGAAAAATATGTGTTCTAGAACTTTTGAGCACGAAAAGTGTACAATCATTTCGTCAAATTAGAGAAGAAGAAGTTGACGAATTGGTGAGTAAAATACGCGAAGCTAGCTCGAATAATGCATATGTGAATTTAAGTGAGTTGTTTCTTGAAACTACAAACAATATTATTTGTACATGTTCTCTTGGAAGAAAATATGAAGGAGCTAGTGAAAGTGACAATAGGGTGAAAGAGATAGCAAGGGATATTATGACTCATCTTTCTACTTTTATGGTTGGAGATTACTTCCCTTCATTGGCTTGGGTTGATGTTCTTAGAGGAAAAATTGGGAAAATCAAGGATACTTCTCAAGCACTAGGTCGTGTGTTTGATCAAGTGATTGAAAAGCGTTTGGATGTAAAAGAGATTGAAAATGATCAAATTAAGAAGAAAGGGTTTATTGATATTCTTCTTCAACTCAAAGAGGATGGCATGCTTGGCTTTGAGCTCTCCAATAATGATGTCAAAGCAATTCTAACAAACATGTTTGTGGGAGGAACCGATACAACCGCAACAACATTAGAATGGGGGGTTTCAGAGCTCGTGAAACATCCAACCATAATGAAGAAAACACAAGAAGAAGTAAGAAGAGTTGTAAATGATAAATCAAAAGTAGAAGAAAGTGATATCAATCAAATGAACTATTTAAAGTGCGTAGTGAAAGAAACTCTCAGATTACATCCGGTTCTTCCTCTTTTGGTTCCTCGAGAAACAATATCTAGCGTGAAATTAAACGGGTATGACATTCCTGAGAAAACAAGTGTATATTTCAATGCATGGGCAATACAGAGAGATCCTAAAAATTGGGAAAACCCGGATGAATTCAAGCCAGAGAGATTTGAACATAATCAAGATGGTTTTAAAGTTGAAGATTTTCATTTTATTCCATTTGGTTTTGGGAGAAGGGGATGTCCAGGAATAAATTTTGGAATAATTGTTATTGAATATGTGCTTGCTAGTCTTCTTTATTGGTTTGATTGGAAGCTAATAGAAACAAATTCAGGTAATTATGATATAGATATGAGAGAGATATTTGGACTTGGTCTCACAAAGAAAGAACCACTTATTTTAAAACCAATAACATTTTCATTTTAA 1560 0.3391 MALKIWSHEQIKLVFSSPICLSFFFLVSVLIVFNLAIKKPKSKTNLNKLPSPPKLPIIGNLHQLGTLPFRSLRDLSLKYGNMMLLQLGWKKALVISSAEVALEIMKTHDLAFSNRIQNTTTNIVFYGCTDVGFQNYGENWRQKRKICVLELLSTKSVQSFRQIREEEVDELVSKIREASSNNAYVNLSELFLETTNNIICTCSLGRKYEGASESDNRVKEIARDIMTHLSTFMVGDYFPSLAWVDVLRGKIGKIKDTSQALGRVFDQVIEKRLDVKEIENDQIKKKGFIDILLQLKEDGMLGFELSNNDVKAILTNMFVGGTDTTATTLEWGVSELVKHPTIMKKTQEEVRRVVNDKSKVEESDINQMNYLKCVVKETLRLHPVLPLLVPRETISSVKLNGYDIPEKTSVYFNAWAIQRDPKNWENPDEFKPERFEHNQDGFKVEDFHFIPFGFGRRGCPGINFGIIVIEYVLASLLYWFDWKLIETNSGNYDIDMREIFGLGLTKKEPLILKPITFSF 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02914 519 PANTHER CYTOCHROME P450 71B11-RELATED 30 514 - -
Trre16g02914 519 FunFam Cytochrome P450 83B1 35 513 - -
Trre16g02914 519 Coils Coil 343 363 - -
Trre16g02914 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Trre16g02914 519 CDD CYP71-like 78 510 - -
Trre16g02914 519 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 Pfam Cytochrome P450 50 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 Gene3D Cytochrome P450 38 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 SUPERFAMILY Cytochrome P450 50 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02914 519 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02914 Trre-Chr16 24932828 24934737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02914 23 510 Cytochrome P450 AT3G48270 43.177 1.52e-137 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02914 K20617 - gmx:100781909 623.624