Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02857 ATGGAAGTTCCCAAATCCCCTTCCAAAGATAAACGATTCGCCACCAAACATAAATTCTTGTGCAAAATCAGCGCACTCATTTTCATCCTGATATTGTTGTTTCTAGGTTTCTATCTAGAGTCTTATAACTCGAAACCGAATTCATCGTCGTATTACACTGTTGTTATAGACTGTGGAAGTACAGGAACACGTGTTAATGTGTATCAATGGATGTTAGGGAGTGTAGTAGTAGGTAACAAAAGTTTGCCAATTTTGCTGCATTCATATCCTGATAATAATGAAACTACTAGGAATAGTTCACTTTGGAAAACTTCTTGTCAATATCATTGTATGCAAACCGAACCCGGGTTAGATAAATTGGTTAATGATTCTTTAGGGGTGAGAGGAGCTTTGGAGCCTTTGATTCTGTGGGCAGAAAGTTTAGTTCCCCGTGAAATGCACCGTGACACGCCTATTTTTGTTATGGCTACTGCTGGAATGAGGAGGATTAAGAGGGATGATGCGTATCGGGTTTTGGAGGATGTTGAGGCTGTTGTGAAAGATCATTCTTTTATGTTTGATAAGAGGTGGATTAGGGTTTTGAGTGGGAGGGAGGAAGCTTATTATGGTTGGGTGGCTTTGAATTATAAAATGGGAAGTTTTGATGATCATCATCTTCCTGGGTCTTCCACTTTGGGACTTGTTGATTTGGGTGGCTCGTCGTTGCAGATTGTTGTGGAGATAGATCGTGATACCGGGGATGATGTAAATGCGATGAGATCGGAGTTTGGTTCGATTGAACATAGGATTGTGGCATACTCTTTGCCTGCATTTGGGTTAAATGAAGCATTTGATAGGACTGTTGCTATGCTTGGAAATAATCAGAGTGTAGAAAGAACAGGAGGTGTATCTGAACTCAGACATCCTTGTCTGATGTCTACTTTTGCACAAAACTATACCTGCAATTATTGCTTTGGATTTGATGCCGCTGACCCAAAAAATCATAGCCAACTCCAGAAAACATTAAATCTTATTGGAGAACCTGACTGGGAACAATGCAGAGAAATCGCTATTGCTGCTGCAATGAACTTGAGCGAATCCCGTGTGTCCCATCAGGCAGTTGGTCCAAATTGCCAAGCAAGTTTATTTTCTGGAATTGGCACTGGTGCACTTAATTTAACAGCTGTTGCTCACCCAACAAAGCGATTTCATGCTTTATCTGGTTTCTTTTTTGTCTACAATAAGCTAAATTTGAGCCCAAAAGCAAATCTAACAATGATTTGGGAGTCAGGCAAGCAAATATGTTCAAATTTATGGACTGGTTTGAGCAGTACTTCCGACAATCCAAATTACGCTGGACAATTTTGTTTCCGGGTAGCTTATATGGCATCGCTGATCGAGTATGGTCTGTGTCTTGGTGATGTAGAAATGGAATTTGGTCCAGGCGATGTTTCCTGGACATTAGGAGCTGCATTAGTTGAAGGGAAGTTTCAGTGGTTAAATATTGCAAACCACAAATCCCAGACTATAATTTCAACTTTAAAGAATGTGAAGGTCATGTCATCTTCAACTTCTCTTTTTGCTGTACTTCTGTTGCTTTTATTGATTGTTTATTGTACTCAAATCAAGCTACCTATGCCAAGCAGAAGGGCTTCTGCTCCTGGCTCATCTTTGCCATCCCATACTCATACAAGACACCGATCTAACTAA 1689 0.4038 MEVPKSPSKDKRFATKHKFLCKISALIFILILLFLGFYLESYNSKPNSSSYYTVVIDCGSTGTRVNVYQWMLGSVVVGNKSLPILLHSYPDNNETTRNSSLWKTSCQYHCMQTEPGLDKLVNDSLGVRGALEPLILWAESLVPREMHRDTPIFVMATAGMRRIKRDDAYRVLEDVEAVVKDHSFMFDKRWIRVLSGREEAYYGWVALNYKMGSFDDHHLPGSSTLGLVDLGGSSLQIVVEIDRDTGDDVNAMRSEFGSIEHRIVAYSLPAFGLNEAFDRTVAMLGNNQSVERTGGVSELRHPCLMSTFAQNYTCNYCFGFDAADPKNHSQLQKTLNLIGEPDWEQCREIAIAAAMNLSESRVSHQAVGPNCQASLFSGIGTGALNLTAVAHPTKRFHALSGFFFVYNKLNLSPKANLTMIWESGKQICSNLWTGLSSTSDNPNYAGQFCFRVAYMASLIEYGLCLGDVEMEFGPGDVSWTLGAALVEGKFQWLNIANHKSQTIISTLKNVKVMSSSTSLFAVLLLLLLIVYCTQIKLPMPSRRASAPGSSLPSHTHTRHRSN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02857 562 Gene3D - 40 195 - -
Trre16g02857 562 Pfam GDA1/CD39 (nucleoside phosphatase) family 47 489 IPR000407 GO:0016787
Trre16g02857 562 Gene3D Exopolyphosphatase. Domain 2 196 472 - -
Trre16g02857 562 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 20 488 IPR000407 GO:0016787
Trre16g02857 562 MobiDBLite consensus disorder prediction 540 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02857 Trre-Chr16 24213369 24216262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02857 14 487 Nodulin-like Gene Family AT4G19180 35.892 6.31e-91 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02857 - - gmx:100775757 789.26