Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02809 ATGGTGGAAACTGAGGGTATGTTTAGGGAAAGATCTATTTTGCTGCGGTTTGCTGATTTGGTTGAGAAACACAATGATGAGATTGCAGCTCTGGAGGCATGGAACAATGGAAAGCTTTATGAACAGGCTGCCAAGGCTGAATTACCTATGTTTGTGCGTTTATTTCGCTATTATGCTGGTTGGGCAGATAAAATTCATGGGTTGACAGTTCCAGCTGATGGAGATTATCATGTCCAGACATTGCATGAACCAATTGGCGTAGCAGGACAAATTATACCTTGGAATTTTCCTCTACTTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTGTCCTCAAGACTGCTGAGCAAACACCGCTAACGGCTCTCGTTGTGGCAAAACTACTTCATGAGGCTGGTCTTCCCCCAGGTGTTCTGAATATAGTTTCTGGGTATGGTCCAACTGCTGGTGCACCTCTTGCAAGTCATATGGATGTAGACAAGTTAGCATTCACCGGATCAACAGATACCGGAAAAACTGTACTTGAACTGGCTGCAAGAAGCAATCTTAAGCCAGTAACATTGGAACTTGGAGGGAAATCACCTTTCATTGTTTTTGAGGATGCTGATGTTAACAAGGCTGTTGAAATTGCACACTTTGGTTTGTTCTTTAATCAGGGGCAATGTTGCTGTGCTGGATCCCGTACCTTTGTACATGAGCGTATCTATGACGAGTTCTTGGAGAAATCAAAAGAACGGGCTTTGCGACGCATTGTTGGTGATCCATTTAAGAAGGGTGTAGAACAAGGTCCTCAGAAAGTGCTTAGGTACATAAGGTCTGGAATTGATAGCAATGCTACTCTTGAATGTGGAGGTGGGAGATTGGGTTCAAAAGGCTTCTTTGTCCAGCCAACTGTATTCTCCAATGTTCAGGATGATATGCTGATAGCAAAAGATGAAATCTTTGGCCCAGTTCAGATCATCTTGAAGTTCAAGGACATTGATGAAGTGATACGACGGGCAAATGCAACACGTTATGGTTTAGCGGCAGGTGTTTTCACAAAAAATGTGAGCACAACCAACACTATGATGAGGGCACTAAGAGCTGGAACAGTGTGGATTAATTGCTTTGATGTGTTTGATGCTGCAATTCCTTTTGGTGGTTACAAAATGAGTGGAATTGGTAGGGAGAAAGGAATATACAGTCTTCACAACTATCTGCAGGTAAAAGCTGTGGTGACTCCACTGAACAATCCTGCATGGTTGTGA 1263 0.4307 MVETEGMFRERSILLRFADLVEKHNDEIAALEAWNNGKLYEQAAKAELPMFVRLFRYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTALVVAKLLHEAGLPPGVLNIVSGYGPTAGAPLASHMDVDKLAFTGSTDTGKTVLELAARSNLKPVTLELGGKSPFIVFEDADVNKAVEIAHFGLFFNQGQCCCAGSRTFVHERIYDEFLEKSKERALRRIVGDPFKKGVEQGPQKVLRYIRSGIDSNATLECGGGRLGSKGFFVQPTVFSNVQDDMLIAKDEIFGPVQIILKFKDIDEVIRRANATRYGLAAGVFTKNVSTTNTMMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLNNPAWL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02809 420 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 221 232 IPR016160 GO:0016491
Trre16g02809 420 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 11 410 IPR016162 GO:0016491
Trre16g02809 420 FunFam Aldehyde dehydrogenase, putative 382 408 - -
Trre16g02809 420 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 199 381 IPR016163 GO:0016620
Trre16g02809 420 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 193 200 IPR029510 GO:0016491
Trre16g02809 420 FunFam Aldehyde dehydrogenase family 1 member A3 5 242 - -
Trre16g02809 420 Pfam Aldehyde dehydrogenase family 11 410 IPR015590 GO:0016491
Trre16g02809 420 FunFam Mitochondrial aldehyde dehydrogenase 2 199 381 - -
Trre16g02809 420 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 10 410 - -
Trre16g02809 420 SUPERFAMILY ALDH-like 12 415 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02809 Trre-Chr16 23818544 23821080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02809 10 420 Aldehyde Dehydrogenase Gene Family AT3G48000 80.191 0.0 719