Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02795 ATGAAACGATATTTGTTGGAATGTACTCCATTTGCAGCAATGGTGATTGTAGAGTGCCTTAACGTAGGGTTGACCACATTGAGTAAAGCAGCCATGTCTACAAAAGGAATGAACCACTTCATCTTTGTTCTCTACTCCAATGCTCTTGCCACTCTCATTCTCCTCCCTTCTTCTTTCCTCATCAACAGGTCAACAAGACAACCCCTTTCTTTCTCGCTTCTTGGAAAATTCTTCTTCCTCGGCCTTGTCGGCATAACTATCATGCAGAATTGTGCATTCACCGGCATAAGCTACAGCTCTCCCACCCTAGGATCTGCTATGAGCAACTTCACTCCAGCAATTACTTTTGTTCTAGCTGTCATCTTCAGGATGGAGAAGTTCGATGTTCGAAGCTCAATAACCCAGATTAAAATTGTGGGGACTGTGGTGTCTATCTCAGGAGCATTTCTAGTGACCTTTTACAAGGGCGCTCCCATTCGCAGCTTCCAAACTCAGCACTCTACATTGCAACCATTGGTGTCTCTATTGGAAGAAACCAGTAACTGGGTCATTGGAGGTCTCTTCCTAGCCATTGCCTCTATATCTTTAGCAGCATGGAATATTGCTCAGGCAGCAATTCTTAAAGGATATCCATCTCAGTTGACCATAGTTGCATTATATTGCCTGTTTGGAACATTTCAATGTGCAATACTTTCTCTGATTGTAGTCAAAGATCCAAGTTCCTGGAAACTAAGTCTTGACATTAAGCTAATCTCTATAATCTATTCAGCTATTTTCGGAACTGTGGTGTCATTTTCTGTACTTACTTGGTGCATAGATAGGAAAGGACCTCTATTTGTTACCATGTTCAAGCCTGTTGGGATTGCCATTGCTGCATTTATGAGTGTTGCCTTCCTTGGTGAAACACTCCATATTGGCAGTGTCATCGGCACACTAGTAATCGCCATTGGATTTTACGCAGTAATGTGGGCACAATCTAGAGAGAAAAATATGAAAGGCCTTGAAGTTAATAGATTACCATCATCCTCATCTGTCCTAGAAAGTCCTCTACTAGAGTCTCCATGA 1065 0.4216 MKRYLLECTPFAAMVIVECLNVGLTTLSKAAMSTKGMNHFIFVLYSNALATLILLPSSFLINRSTRQPLSFSLLGKFFFLGLVGITIMQNCAFTGISYSSPTLGSAMSNFTPAITFVLAVIFRMEKFDVRSSITQIKIVGTVVSISGAFLVTFYKGAPIRSFQTQHSTLQPLVSLLEETSNWVIGGLFLAIASISLAAWNIAQAAILKGYPSQLTIVALYCLFGTFQCAILSLIVVKDPSSWKLSLDIKLISIIYSAIFGTVVSFSVLTWCIDRKGPLFVTMFKPVGIAIAAFMSVAFLGETLHIGSVIGTLVIAIGFYAVMWAQSREKNMKGLEVNRLPSSSSVLESPLLESP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02795 354 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Trre16g02795 354 Pfam EamA-like transporter family 24 152 IPR000620 GO:0016020
Trre16g02795 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Trre16g02795 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 328 - -
Trre16g02795 354 PANTHER WAT1-RELATED PROTEIN 10 331 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02795 Trre-Chr16 23725746 23727635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02795 2 332 Nodulin-like Gene Family AT5G40240 44.643 9.15e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02795 - - psat:127073896 511.146