Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02794 ATGGAAATGAAACGATATTTGTTGGAATGTACTCCATTTGCAGCAATGGTGATTGTAGAGTGCCTTAACGTAGGGTTGACCACATTGAGTAAAGCAGCCATGTCTACAAAAGGAATGAACCACTTCATCTTTGTTCTCTACTCCAATGCTCTTGCCACTCTCATTCTCCTCCCTTCTTCTTTCCTCATCAACAGGTCAACAAGACAACCCCTTTCTTTCTCGCTTCTTGGAAAATTCTTCTTCCTCGGCCTTGTCGGCATAACTATCATGCAGAATTGTGCATTCACCGGCATAAGCTACAGCTCTCCCACCCTAGGATCTGCTATGAGCAACTTCACTCCAGCAATTACTTTTGTTCTAGCTGTCATCTTCAGGATGGAGAAGTTCGATGTTCGAAGCTCAATAACCCAGATTAAAATTGTGGGGACTGTGGTGTCTATCTCAGGAGCATTTCTAGTGACCTTTTACAAGGGCGCTCCCATTCGCAGCTTCCAAACTCAGCACTCTACATTGCAACCATTGGTGTCTCTATTGGAAGAAACCAGTAACTGGGTCATTGGAGGTCTCTTCCTAGCCATTGCCTCTATATCTTTAGCAGCATGGAATATTGCTCAGGCAGCAATTCTTAAAGGATATCCATCTCAGTTGACCATAGTTGCATTATATTGCCTGTTTGGAACATTTCAATGTGCAATACTTTCTCTGATTGTAGTCAAAGATCCAAGTTCCTGGAAACTAAGTCTTGACATTAAGCTAATCTCTATAATCTATTCAGCTATTTTCGGAACTGTGGTGTCATTTTCTGTACTTACTTGGTGCATAGATAGGAAAGGACCTCTATTTGTTACCATGTTCAAGCCTGTTGGGATTGCCATTGCTGCATTTATGAGTGTTGCCTTCCTTGGTGAAACACTCCATATTGGCAGTGTCATCGGCACACTAGTAATCGCCATTGGATTTTACGCAGTAATGTGGGCACAATCTAGAGAGAAAAATATGAAAGGCCTTGAAGTTAATAGATTACCATCATCCTCATCTGTCCTAGAAAGTCCTCTACTAGAGTCTCCATGA 1071 0.4211 MEMKRYLLECTPFAAMVIVECLNVGLTTLSKAAMSTKGMNHFIFVLYSNALATLILLPSSFLINRSTRQPLSFSLLGKFFFLGLVGITIMQNCAFTGISYSSPTLGSAMSNFTPAITFVLAVIFRMEKFDVRSSITQIKIVGTVVSISGAFLVTFYKGAPIRSFQTQHSTLQPLVSLLEETSNWVIGGLFLAIASISLAAWNIAQAAILKGYPSQLTIVALYCLFGTFQCAILSLIVVKDPSSWKLSLDIKLISIIYSAIFGTVVSFSVLTWCIDRKGPLFVTMFKPVGIAIAAFMSVAFLGETLHIGSVIGTLVIAIGFYAVMWAQSREKNMKGLEVNRLPSSSSVLESPLLESP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02794 356 PANTHER WAT1-RELATED PROTEIN 12 333 IPR030184 GO:0016020|GO:0022857
Trre16g02794 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Trre16g02794 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 330 - -
Trre16g02794 356 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020
Trre16g02794 356 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02794 Trre-Chr16 23725746 23727641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02794 4 334 Nodulin-like Gene Family AT5G40240 44.643 7.31e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02794 - - psat:127073896 514.998