Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02749 ATGGAAACAACCAAGCGCCGCGAGAAGTTGCAATGGGAGTACACCATCGCAAGCATAGCCTCCAGATTCACCACCTTAACCATCAAGCATCCTCTTGACGTTGTCCAAACTAGGTTTCAAGTTAATGATGGTCGACTCTTCTCTCAACTTCCTAGATACAACAACACCGCACACGCCATTTTCACCATTGCTCGCTTAGAGGGATTGAGAGGGCTATATGCAGGCTTTCTTGCTGGGGCTCTTGGCTCAACTATTACAACGGGTTTAGCACTCTTATCCTTTGCCAAAGCTAAACAAAGACATGATATGAGCAGTGAGGAGAAGTTTACTCCAGATATTGCCTCACTTATGGAAGCAGGAGTTTGGGTTTGCTTGTGCACAAATCCTTTTTCGCTAGTGAAGAGAAGACTGCAGCTTCAGACACCTCTTCATCAGGCACGGCCATACTCTGGACTATATGATGCGTTTAGGACCATAAAGAGGGAAGAAGGATTTAGTGCACTTTTCAGAGGGATTGTTCCTGGTTTATTACTGGTCTCTAATCTTGCTATTAACTTCACAGTATACAAGGAGCTTCGTAAAACTGTTGTCGATTTGAAGACCAAAGGAAGTAAAATACAACATCAAAACCCTGATCAAATCTTGAACTCTGTTGAATTTGCTGTTCTTGGAGCAACATCAAACGTTGTTGCAATGCTCCCAACCTATCCATTTCATGTTATACGGACTCGTTTGCAGCAACGACCTGGCGGTGATGGGATACCAAGATATAGAAACAGTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTGTCCGAGGGTTTTACAAGGGAATCACTCCGCACCTGTTGATAAACATTCCTGTTGCTTCAATGTCATTTATTGTTTATGAAAATGTTTTAAAATTACTTAAACTGGCTAAAAGGAATGACTGA 939 0.4249 METTKRREKLQWEYTIASIASRFTTLTIKHPLDVVQTRFQVNDGRLFSQLPRYNNTAHAIFTIARLEGLRGLYAGFLAGALGSTITTGLALLSFAKAKQRHDMSSEEKFTPDIASLMEAGVWVCLCTNPFSLVKRRLQLQTPLHQARPYSGLYDAFRTIKREEGFSALFRGIVPGLLLVSNLAINFTVYKELRKTVVDLKTKGSKIQHQNPDQILNSVEFAVLGATSNVVAMLPTYPFHVIRTRLQQRPGGDGIPRYRNSWHVVKETARFEGVRGFYKGITPHLLINIPVASMSFIVYENVLKLLKLAKRND 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02749 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 195 IPR018108 -
Trre16g02749 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 304 IPR018108 -
Trre16g02749 312 SUPERFAMILY Mitochondrial carrier 12 300 IPR023395 -
Trre16g02749 312 FunFam Folate transporter 1, chloroplastic 104 310 - -
Trre16g02749 312 Gene3D Mitochondrial carrier domain 3 309 IPR023395 -
Trre16g02749 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 100 IPR018108 -
Trre16g02749 312 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 11 307 IPR044712 GO:0006862|GO:0055085
Trre16g02749 312 Pfam Mitochondrial carrier protein 111 196 IPR018108 -
Trre16g02749 312 Pfam Mitochondrial carrier protein 12 98 IPR018108 -
Trre16g02749 312 Pfam Mitochondrial carrier protein 221 306 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02749 Trre-Chr16 23073775 23080540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02749 31 305 Chloroplast and Mitochondria Gene Families AT2G47490 30.282 5.26e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02749 K15115 - gmx:100809599 392.889