Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02742 ATGGGATGGATTATAGGATTATGGTCTTTGATGGGTATTTTTTTATGTTGGTGGTATTTATGTGCGAAGAAGGAGAATAAAGTGATGAAGAAGAATATGAAAAATGGAAAAATTCCAAAAGGGAATAAAGGTTGGCCTTTACTTGGAGAGACCCTTGATTTCATTGCTTGTGGATACACCTCTAATCCTGTTAGCTTCATGGAAAAACGCAAGTCTTTGTATGGTAATGTTTTCAAAACAAACATTTTAGGAACGGGTGTAATTGTGTCCACAGACCCAGAAGTGAACAAGGTGATTCTACAAAACCAAAGCAATATTTTTGTCCCTGCTTATCCAAAATCAATTAGAGAACTAATGGGAGAACACTCTATACTTCAAATGAATGGAAACATGCATAGAAAAATTCATTCACTCCTTGGAGGATTTATGAGATCCCCACAATTCAAAGCTCGAATCACAAGAGATATTGAGCACTCTATCAAACAATGTTTAGCTACTTGGACCCATCAACCAATATATGTTCAAGATCAAGTCAAAAAGATTACGTTTACTATTTTGGTGAAAGTTCTGATGAGCATTGATCCCGGTGAAGATTTATATATGTTAAAGAGAGAATTTGAAGAGTTCATCAAAGGATTGATTTGCTTGCCCATAAAATTTCCAGGAACAAGACTATATAAATCCTTGAAGGCTAAGGAAAGAATGATGAAAATTGTGCAGAGAATAATAGAGGAAAGGATTAATTATTATAAGAATAATAAGGATTGTGTGACAAATGATGTAGTGGATGTACTCTTACAAGATAAAGGTGATTCTAACACAATTCCTAATATATGGTTGAAAAATATGAGTGAGAATATCATTGAGATGATGATTCCTGGGGAAGAGACTCTTCCTACAGCTATGACCATGGCAGTCAAGTTTCTCAGTGACTCTCCTCTTGCTCTATCCAAATTAGTGGAAGAGAACATGGAATTGAAGAGGAACAAGAATTATTCTGATGGTTATGCATGGACTGACTATCTCTCACTACAATTTACTCAAAATGTAATCAGTGAAACTCTTAGAATGGCAAATATTGTCAATGCTATTTGGAGAAAAGCTATCAAAGATGTTGATATAAAAGGGTACCTAATTCCTAAGGATTGGTGTGTTGTGGCATCTCTTACATCTGTTCATTTAGATGGCATGAACTATGAAAAACCATTTGAGTTTGATCCATGGAGATGGGAGAAAATTGAAGCTGGGACTAGAAACAATTGTTTTACACCATTTGGTGGTGGACAAAGATTATGTCCAGGGATAGAACTCTCTAGGCTAGAGCTCTCTATTTTCCTTCATCATTTAGTTACAACTTACAGATGGGTTGCTGAAAAAGATGAAATTATTTACTTTCCAACAGTAAAGATGAAAAGGAAGCTCCCAATTAGTGTGACAACCCTAAACCATTAA 1452 0.3526 MGWIIGLWSLMGIFLCWWYLCAKKENKVMKKNMKNGKIPKGNKGWPLLGETLDFIACGYTSNPVSFMEKRKSLYGNVFKTNILGTGVIVSTDPEVNKVILQNQSNIFVPAYPKSIRELMGEHSILQMNGNMHRKIHSLLGGFMRSPQFKARITRDIEHSIKQCLATWTHQPIYVQDQVKKITFTILVKVLMSIDPGEDLYMLKREFEEFIKGLICLPIKFPGTRLYKSLKAKERMMKIVQRIIEERINYYKNNKDCVTNDVVDVLLQDKGDSNTIPNIWLKNMSENIIEMMIPGEETLPTAMTMAVKFLSDSPLALSKLVEENMELKRNKNYSDGYAWTDYLSLQFTQNVISETLRMANIVNAIWRKAIKDVDIKGYLIPKDWCVVASLTSVHLDGMNYEKPFEFDPWRWEKIEAGTRNNCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAEKDEIIYFPTVKMKRKLPISVTTLNH 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02742 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Trre16g02742 483 Pfam Cytochrome P450 39 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 Gene3D Cytochrome P450 27 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 PANTHER CYTOCHROME P450 26 36 456 - -
Trre16g02742 483 CDD CYP90-like 70 479 - -
Trre16g02742 483 SUPERFAMILY Cytochrome P450 34 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02742 483 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 28 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02742 Trre-Chr16 22865798 22877451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02742 37 454 Cytochrome P450 AT3G13730 53.081 2.88e-165 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02742 K12637 - gmx:100812489 826.624