Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02731 ATGGATTTACTTCATCTAGCAAAAATCACACTAGAACCATTTCAAACAACTCTATTATTGCTTTTTCCACTCACTTTAGTTCTACTACTAAATTTAGCATCCAAAATTCAAAAAAAAGCCCCATATCCACCAGGACCAAAAGGTTTACCCTTAATAGGCAACATGAACATGATGGACAAACTCACACATAGAGGTTTAGCAAATTTAGCAAAACTATATGGTGGGGTTTTGCACCTACGCATGGGATTTATCCACATGGTAGCAATTTCAAACGCGGAAGCCGCGCGTGAAGTGTTACAATTACATGACAACATATTCTCCAATCGTCCGGCAACAATAGCCATAAGTTACCTTACTTATAACCGCGCTGACATGGCGTTCGCTCACTACGGTCCCTTTTGGCGCCAAATGAGAAAACTTTGTGTCGTGAAACTCTTTAGCCGCAAACGTGCAGAGTCCTGGCAATCTGTTAGAGATGAAGTTGATGAGGTTATCACCTACGTTAATGACAACGTGGGAAAGCCGGTTAATGTTGGTGATTTGGTTTTTAATTTAACCAAAAACATTATTTATCGCGCAGCTTTTGGGTCGAGTTCAAAAGAAGGACAAGATGAGTTTATTTCGATACTTCAAGAGTTTTCGAAATTGTTTGGAGCTTTTAATATTGCTGATTTTGTTCCTTTTTTAAGAGTGGTTGATCCTCAAGGTTTTAATGCTAGGCTTGTTAAGGCTAGAGGTGCTTTGGATGGTTTTATTGATAAGATTTTTGATGAACATTTGGAGAAGAAGAGGAATATGGGTGATGATTGTTGTGATGAGGATAGTGATATGGTTGATGAATTATTGGCTTTTTATAGTGATGAAGCTAAAGTGAGTAATGAATCCGATGATCTTCAGAACTCCATCAAACTCACTAGGGATAACATCAAAGCCATCATCATGGACGTGATGTTTGGAGGAACAGAAACGATGGATATGAATGATGTTTTTGGACTCACGGCTCCTAGAGCGAGTCGACTCGTTGCTGTTCCAGCTAAGCGTGTTGTATGCCCTCTCTGA 1059 0.3947 MDLLHLAKITLEPFQTTLLLLFPLTLVLLLNLASKIQKKAPYPPGPKGLPLIGNMNMMDKLTHRGLANLAKLYGGVLHLRMGFIHMVAISNAEAAREVLQLHDNIFSNRPATIAISYLTYNRADMAFAHYGPFWRQMRKLCVVKLFSRKRAESWQSVRDEVDEVITYVNDNVGKPVNVGDLVFNLTKNIIYRAAFGSSSKEGQDEFISILQEFSKLFGAFNIADFVPFLRVVDPQGFNARLVKARGALDGFIDKIFDEHLEKKRNMGDDCCDEDSDMVDELLAFYSDEAKVSNESDDLQNSIKLTRDNIKAIIMDVMFGGTETMDMNDVFGLTAPRASRLVAVPAKRVVCPL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02731 352 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02731 352 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02731 352 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02731 352 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02731 352 SUPERFAMILY Cytochrome P450 43 324 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02731 352 Gene3D Cytochrome P450 35 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02731 352 Pfam Cytochrome P450 43 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02731 352 PANTHER CYTOCHROME P450 84A1-RELATED 14 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02731 Trre-Chr16 22780671 22785163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02731 324 352 Monolignol Biosynthesis Gene Families AT4G36220 68.966 5.03e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02731 K09755 - gmx:100807448 475.707