Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02714 ATGAGGTGGTGCAGTCAGGTTATCTCATTATCGTCTGCACATGCACTCGCTCCTGTATCTTTCTTCTGCAACAAAACTGTACTACCATTTCAATTTCAAAACCCTTTCTTCTTCTTCAAATTCAAATTCAAATTCAACAACTTCTCCTTTTCTTCTACCTCTATCATCCATCGGAATCCGTTGCCAGCTCAAGTACTACCCTCATGCTCAACGGACGCTTTTGATTTTGTAGTCGTTAATTTCTACCATTTCGTGTTCATCAAAGACCCTCTACAAGAAGTCGCTAAACACCTCTCTTTCCTCGAATCCGAGGGTCTAGATATCCATGGAAGAATCTATTTGAATGAACAAGGGATTAATGCGCAGTATAGTGGGCCATCAAAAGATGCTATGGTTTATGTCAACTGGATAAAAGAGGATGACAAGTTTTCCGACATCCTGGTTCAGATATCTCAATCAGAAACTGGACACACCTTTCCATCATTGAAGTTGCGGTATAAGCCTTCATTAGTACAGTTTAAAAGTGACATATCAGATCTTCCGGTGCTTGATCCTTCAATGCGGGCAATACCTTTAGCACCTTCAGAATGGAGAGATAAATTAGAAGCCATCAATAGAAATGATCCACATTCAAAAGATTATCCTAAAAGAGATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGACATTGGACATTTTCGTGGGGCTCAACGACCTAATGTGGACTGCTTTAGGAGCACTTCATTTGGACTGTCTCAGGAAGAGATCACTGCTTCAGACCCTTTATCAAATGTAGATAAAGAAAATACAAATATATTGATGTATTGCACAGGAGGGATTCGCTGTGATGTGTATTCTACAATACTGAGGTAA 879 0.3959 MRWCSQVISLSSAHALAPVSFFCNKTVLPFQFQNPFFFFKFKFKFNNFSFSSTSIIHRNPLPAQVLPSCSTDAFDFVVVNFYHFVFIKDPLQEVAKHLSFLESEGLDIHGRIYLNEQGINAQYSGPSKDAMVYVNWIKEDDKFSDILVQISQSETGHTFPSLKLRYKPSLVQFKSDISDLPVLDPSMRAIPLAPSEWRDKLEAINRNDPHSKDYPKRDYILLDVRNGYEWDIGHFRGAQRPNVDCFRSTSFGLSQEEITASDPLSNVDKENTNILMYCTGGIRCDVYSTILR 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02714 292 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 189 292 IPR036873 -
Trre16g02714 292 Gene3D - 68 171 - -
Trre16g02714 292 Gene3D - 185 292 IPR036873 -
Trre16g02714 292 ProSiteProfiles Rhodanese domain profile. 215 292 IPR001763 -
Trre16g02714 292 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 72 292 IPR020936 -
Trre16g02714 292 Pfam UPF0176 acylphosphatase like domain 77 168 IPR040503 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02714 Trre-Chr16 22523639 22527702 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02714 75 292 Sulfurtransferasese or Rhodanese AT1G17850 67.890 4.28e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02714 - - mtr:25488455 408.297