Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g02693 | ATGCTCTCAGTTTCTTTTATCACACCTCTCAGCACCGCCGCCAATTTCGCCGGAAAAACCATCTTATCACGGCCGTGCCACGTCAGATCCCGGCGAGTTCTCATTTCCTCCACAGCCACTGTTACTGAAGCTACCTCAACTCAGCTTCCTCACGCCATGGCTTCATGCACGTCACTTTATGAGATTCTTGGAATTGCGTCTGCTTCTTCTGATCAGGAGATTAAGGCAGCGTACCGACGACTCGCCAGAGTTTCTCATCCTGACGTGGCGGCGATTGATCGGAAGGATTCATCGGCGGATGAGTTCATGAAGATTCATGCTGCGTATTCCACGCTGTCAGATCCTGAGAAGCGTGCTAGCTATGATAGAAGTGTTAGAAGAGATTCTGAAGGTGATTCAGATTCTGAAGGTGATTCAGGCTCTGAAGGTGATTCAGGTTCTGAAGGTGATTCAGGTTCTGAAGGTGATTCAGACTCTGAAAGTGGTCCTGAAGGAGACTCTGAAAGTCAAGGCTCTGATGTTGAAGCTTCTGAAGATAAAGCCGGAAAAAGTCAGGGTTTTCACGAGGAGGAAAAAGCAAAGGTTCATTACATCGCCCATTTAAGTTGA | 609 | 0.4778 | MLSVSFITPLSTAANFAGKTILSRPCHVRSRRVLISSTATVTEATSTQLPHAMASCTSLYEILGIASASSDQEIKAAYRRLARVSHPDVAAIDRKDSSADEFMKIHAAYSTLSDPEKRASYDRSVRRDSEGDSDSEGDSGSEGDSGSEGDSGSEGDSDSESGPEGDSESQGSDVEASEDKAGKSQGFHEEEKAKVHYIAHLS | 202 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g02693 | 202 | Pfam | DnaJ domain | 59 | 122 | IPR001623 | - | |
Trre16g02693 | 202 | SMART | dnaj_3 | 57 | 117 | IPR001623 | - | |
Trre16g02693 | 202 | ProSiteProfiles | dnaJ domain profile. | 58 | 125 | IPR001623 | - | |
Trre16g02693 | 202 | SUPERFAMILY | Chaperone J-domain | 53 | 128 | IPR036869 | - | |
Trre16g02693 | 202 | PANTHER | DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED | 36 | 180 | - | - | |
Trre16g02693 | 202 | Gene3D | DnaJ domain | 45 | 140 | IPR036869 | - | |
Trre16g02693 | 202 | MobiDBLite | consensus disorder prediction | 116 | 134 | - | - | |
Trre16g02693 | 202 | MobiDBLite | consensus disorder prediction | 135 | 163 | - | - | |
Trre16g02693 | 202 | CDD | DnaJ | 60 | 114 | IPR001623 | - | |
Trre16g02693 | 202 | MobiDBLite | consensus disorder prediction | 173 | 202 | - | - | |
Trre16g02693 | 202 | PRINTS | DnaJ domain signature | 78 | 93 | IPR001623 | - | |
Trre16g02693 | 202 | PRINTS | DnaJ domain signature | 60 | 78 | IPR001623 | - | |
Trre16g02693 | 202 | PRINTS | DnaJ domain signature | 117 | 136 | IPR001623 | - | |
Trre16g02693 | 202 | PRINTS | DnaJ domain signature | 97 | 117 | IPR001623 | - | |
Trre16g02693 | 202 | MobiDBLite | consensus disorder prediction | 113 | 202 | - | - | |
Trre16g02693 | 202 | ProSitePatterns | Nt-dnaJ domain signature. | 102 | 121 | IPR018253 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g02693 | Trre-Chr16 | 22374441 | 22383705 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g02693 | 60 | 122 | C2H2 Transcription Factor Family | AT1G74250 | 44.776 | 2.37e-10 | 57.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre16g02693 | - | - | cam:101494220 | 180.259 |