Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02650 ATGAGTCTACCAAACAATGAAACAGTTCCAGCAGTTTTTGTATTTGGTGACTCTATAGTTGATCCTGGAAATAATAACTATATCAACACTCTTATCAAATGTAATTTTCCACCATATGGTAGAGATTTTGATGGAGGAATTCCAACTGGCAGGTTCAGCAATGGTTTTGTCCCATCAGACATAGTTGCTCAAAAATTTGGAGTCAAGGAAGTTTTACCTGCTTATCTTGATCCTAATATACAACTTCAAGATCTTCTTACCGGTGTAAGCTTTGCATCAGGTGGTGCTGGATATGATCCTCTAACCGCGAAAATAATGTTTGTGAAGTCATTATCAGATCAATTAGACATGTTCAAGGAGTACAAGAAGAAGGTAGAGGAAGCAGTTGGAGGAAAGAAAAGAGAAGAAATAGTATCAAAGAGCATATACATAGTGTGCATAGGAAGTGATGACATTGCTAATACTTATGCTCAAACACCATTTAGGCGTATTCAATATGATATTCCATCATACACAGATTTCTTAGTTTCTGAAGCCTCAAAATTCTTGCAGGAACTATATGGAGTGGGAGGTAGAAGGATTGGAGTATTCGATATACCAGTTATAGGGTGTGTGCCCTCACAAAGAACAATTAATGGAGGCAAACATAGAGAATGTTTAAATTCTTCAAACCAAGCAGCAAAACTCTTCAACTCTAAGCTCTTCTTCAAAATGAAGGCACTTGGGAAAGAGCATTCAGATGCTAGATTTGTATATCTAGATTCTTACAATCCATTTGTTGATATCATTCAAAATCCTTCTAAATATGGTTTTAATGAGACAGATAAAGGATGCTGTGGTACAGGAGACATAGAAGTTGGGATTTTGTGCAATCCTTTCATGAACACATGCTCAAATCCTTCAGATTATGTGTTTTGGGATAGTTACCATCCTACAGAGAAGACTTATTATGTGCTTAGTTCACTTGTACTTGATAACAAAATTAAGGACTTCTTCTAA 999 0.3614 MSLPNNETVPAVFVFGDSIVDPGNNNYINTLIKCNFPPYGRDFDGGIPTGRFSNGFVPSDIVAQKFGVKEVLPAYLDPNIQLQDLLTGVSFASGGAGYDPLTAKIMFVKSLSDQLDMFKEYKKKVEEAVGGKKREEIVSKSIYIVCIGSDDIANTYAQTPFRRIQYDIPSYTDFLVSEASKFLQELYGVGGRRIGVFDIPVIGCVPSQRTINGGKHRECLNSSNQAAKLFNSKLFFKMKALGKEHSDARFVYLDSYNPFVDIIQNPSKYGFNETDKGCCGTGDIEVGILCNPFMNTCSNPSDYVFWDSYHPTEKTYYVLSSLVLDNKIKDFF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02650 332 Gene3D SGNH hydrolase 2 328 IPR036514 -
Trre16g02650 332 Pfam GDSL-like Lipase/Acylhydrolase 12 321 IPR001087 GO:0016788
Trre16g02650 332 CDD SGNH_plant_lipase_like 10 326 IPR035669 -
Trre16g02650 332 PANTHER GDSL ESTERASE/LIPASE EXL3 9 321 - -
Trre16g02650 332 FunFam GDSL esterase/lipase APG 1 328 - -
Trre16g02650 332 SUPERFAMILY SGNH hydrolase 11 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02650 Trre-Chr16 21971403 21974146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02650 6 327 Pollen Coat Proteome AT1G75910 40.798 2.59e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02650 - - mtr:11443183 568.926