Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02649 ATGAAATCAGTCTTTGTAATGCTTCTTTCTCCATGGTCTCTAATAATTTATTTGTGTTATTTCATAGCCATAATCTTACAAAATGTTTCTTCTATGAGTCTACCAAACAATGAAACAGTTCCAGCAGTTTTTGTATTTGGTGACTCTATAGTTGATCCTGGAAATAATAACTATATCAACACTCTTATCAAATGTAATTTTCCACCATATGGTAGAGATTTTGATGGAGGAATTCCAACTGGCAGGTTCAGCAATGGTTTTGTCCCATCAGACATAGTTGCTCAAAAATTTGGAGTCAAGGAAGTTTTACCTGCTTATCTTGATCCTAATATACAACTTCAAGATCTTCTTACCGGTGTAAGCTTTGCATCAGGTGGTGCTGGATATGATCCTCTAACCGCGAAAATAATGTTTGTGAAGTCATTATCAGATCAATTAGACATGTTCAAGGAGTACAAGAAGAAGGTAGAGGAAGCAGTTGGAGGAAAGAAAAGAGAAGAAATAGTATCAAAGAGCATATACATAGTGTGCATAGGAAGTGATGACATTGCTAATACTTATGCTCAAACACCATTTAGGCGTATTCAATATGATATTCCATCATACACAGATTTCTTAGTTTCTGAAGCCTCAAAATTCTTGCAGGAACTATATGGAGTGGGAGGTAGAAGGATTGGAGTATTCGATATACCAGTTATAGGGTGTGTGCCCTCACAAAGAACAATTAATGGAGGCAAACATAGAGAATGTTTAAATTCTTCAAACCAAGCAGCAAAACTCTTCAACTCTAAGCTCTTCTTCAAAATGAAGGCACTTGGGAAAGAGCATTCAGATGCTAGATTTGTATATCTAGATTCTTACAATCCATTTGTTGATATCATTCAAAATCCTTCTAAATATGGTTTTAATGAGACAGATAAAGGATGCTGTGGTACAGGAGACATAGAAGTTGGGATTTTGTGCAATCCTTTCATGAACACATGCTCAAATCCTTCAGATTATGTGTTTTGGGATAGTTACCATCCTACAGAGAAGACTTATTATGTGCTTAGTTCACTTGTACTTGATAACAAAATTAAGGACTTCTTCTAA 1092 0.3544 MKSVFVMLLSPWSLIIYLCYFIAIILQNVSSMSLPNNETVPAVFVFGDSIVDPGNNNYINTLIKCNFPPYGRDFDGGIPTGRFSNGFVPSDIVAQKFGVKEVLPAYLDPNIQLQDLLTGVSFASGGAGYDPLTAKIMFVKSLSDQLDMFKEYKKKVEEAVGGKKREEIVSKSIYIVCIGSDDIANTYAQTPFRRIQYDIPSYTDFLVSEASKFLQELYGVGGRRIGVFDIPVIGCVPSQRTINGGKHRECLNSSNQAAKLFNSKLFFKMKALGKEHSDARFVYLDSYNPFVDIIQNPSKYGFNETDKGCCGTGDIEVGILCNPFMNTCSNPSDYVFWDSYHPTEKTYYVLSSLVLDNKIKDFF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02649 363 PANTHER GDSL ESTERASE/LIPASE EXL3 19 352 - -
Trre16g02649 363 CDD SGNH_plant_lipase_like 41 357 IPR035669 -
Trre16g02649 363 Gene3D SGNH hydrolase 29 359 IPR036514 -
Trre16g02649 363 FunFam GDSL esterase/lipase APG 32 359 - -
Trre16g02649 363 SUPERFAMILY SGNH hydrolase 42 356 - -
Trre16g02649 363 Pfam GDSL-like Lipase/Acylhydrolase 43 352 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02649 Trre-Chr16 21971403 21974239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02649 18 358 Pollen Coat Proteome AT1G75910 39.655 7.49e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02649 - - mtr:11443183 583.178