Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02517 ATGGTCTTTGGCAAAACCTCCGGCGCCAAAAGCAACCTCCGAATCTCATCTTCTCTTCAAGATCTCACCTCTTACCGCAACATCATCGATCCACAATATCCAATCTCAACCGTCAATTCAATCAACCAACAACAACAACAACAACAGCTTCTTCTTCAGAACTCAACTTTCTCCAAAACCAAACCAACCCAAATTCCAAACCCGACCCGTAAAAAATGTTGCAAACCCATCGCTTTCATCCTATGCTTCCTCATTTTCATTCTCATCATATACGCCATTTCAACTCTCGTTTATTCTCATCGAAATTCAGGTAAATACTACGTCGTTTTGGATTGTGGTAGTACTGGAACTCGTGTTTACGTTTACAAAGCTGAAATTGAACAAAAATCACAAGATAGTTCAATTCCGATTTCGGTTACTTCGTTGAGAAACGGTTTACAGAAAAAACGCGGTTCACAAAGTGGTCGTGCTTATGATAGAATGGAAACTGAACCGGGTCTTGATAAACTGGTTCATAATGTAACCGGTTTAAAAACTGCTTTGAAACCGCTTATTAAATGGGCTATGAAACAGATTCCAGAAAATTATCATAAAAGCACTTCGCTTTTTCTTTATGCTACTGCTGGTGTTAGAAGGTTACCAAATGAGGATTCAAAATGGTTACTTGATAATGCTTGGAATGTTCTTAAAGGTTATTCTTTTGTATGTAGGAAAGATTGGGTTAAGATTATTAGTGGGACTGAAGAAGCTTATTTTGGGTGGATTGCATTGAATTATGATAGTGGTATTTTGGGTGTTAAACCTAGGAAAGATACTTATGGTGCACTTGATTTAGGTGGGTCTTCTTTGCAGGTTACTTTTGAAGGTGATCAAAATTTGGATAGTGAAACTAGTTTGTTTGTTAGGATTGGTTCCGTTAATCATCATTTAACTGCTTATTCTTTAGCTGGGTATGGTCTTAATGAAGCTTTTGATAAATCTGTTGCTTATGTCTTTAAGAAAAATAAACTTGGTTTAGGTGGGACTGTTAAACATCCTTGTTTGCAAAATGGGTATAAGAGTCAATATACGTGTTCTCGTTGTTTGGCTGTTGAGAAAGAAAAGGAAGTGGAGAGTCCTAAAGTTAATGGGAGTGTCAATGCTGTTGGTGGTGGAAAAGGAGTGTTGAAAACGCCTGTGAGGCTTGTTGGTGCGCCCAATTGGCAAGAGTGTAGTGCCATTGCTAAGGTTGCTGTTAATTTGTCTGAATGGTCTGATGTTGGTCAGGGTCTTGATTGTGAAGTGAATCCTTGTGCTTTGCGTGAGAGTCTTCCTCGCCCGTTAGGCCATTTTTATGTGATTTCTGGATTTTTCGTGGTGTATAGGTTTTTCAATTTGACTTCTGAGGCTACTATTGATGATGTGTTGGAAAAGGGTAGGGAATTTTGTGAAAAAAAATGGGATGTTGCTAAGAAAAGTGTTGCTCCACAGCCCTTTATTGAGCAATATTGTTTCAGGGCACCTTATGTTGCTTCTTTGCTGAGAGAGGGTTTGCATATTACTGATAGACATATAACTGTTGGCTCTGGAAGCATCACTTGGACACTTGGGGTGGCTCTGTTGGAAGCTGGGAAGTCTTATTCCACCAGATTTGGTCTACGGGGATTTGACTTGGTTCAGATGAAGATGAATCCTCTGATTCTTATTCCCATTTTGTTACTTTCTCTTATTCTTTTATGTTGCGCTTTATCGTGTGTCCTCAAATGGGTGCCGAGATTTTTCCGGAGGCAATATCTTCCCCTTTTCAGGCATAACAACCCGTCCAGTGCATCTGTTCTTAAGTCTCCTTTATGGTTCAAGAGTTGGAGTCCAATTATTTCTGGAGAGTCAAGAATAAAGACACCACTCAGCCCAACAATCGCTGGTTCACAAGATAGACCGTTTAGCTTGGGACATGGCCTTGGTGATAACAGTGGCGGCATCCAGCTGATGGAATCTTCTTTTTACCCGGCAGCTAGTAGTGTCTCACACAGTTATTCCTCTACCAATTTAATGCAAATGCCATTTGAGAGTAATAATATAGGGACCTTCTGGCCGCCCCACAGAAGTCAGATGCGTCTGCAGAGTAGAAGATCACAATCTCGAGAAGACTTGAGTTCATCAGTGGCTGATTCACACATAGTGAAGGTTTAG 2172 0.4029 MVFGKTSGAKSNLRISSSLQDLTSYRNIIDPQYPISTVNSINQQQQQQQLLLQNSTFSKTKPTQIPNPTRKKCCKPIAFILCFLIFILIIYAISTLVYSHRNSGKYYVVLDCGSTGTRVYVYKAEIEQKSQDSSIPISVTSLRNGLQKKRGSQSGRAYDRMETEPGLDKLVHNVTGLKTALKPLIKWAMKQIPENYHKSTSLFLYATAGVRRLPNEDSKWLLDNAWNVLKGYSFVCRKDWVKIISGTEEAYFGWIALNYDSGILGVKPRKDTYGALDLGGSSLQVTFEGDQNLDSETSLFVRIGSVNHHLTAYSLAGYGLNEAFDKSVAYVFKKNKLGLGGTVKHPCLQNGYKSQYTCSRCLAVEKEKEVESPKVNGSVNAVGGGKGVLKTPVRLVGAPNWQECSAIAKVAVNLSEWSDVGQGLDCEVNPCALRESLPRPLGHFYVISGFFVVYRFFNLTSEATIDDVLEKGREFCEKKWDVAKKSVAPQPFIEQYCFRAPYVASLLREGLHITDRHITVGSGSITWTLGVALLEAGKSYSTRFGLRGFDLVQMKMNPLILIPILLLSLILLCCALSCVLKWVPRFFRRQYLPLFRHNNPSSASVLKSPLWFKSWSPIISGESRIKTPLSPTIAGSQDRPFSLGHGLGDNSGGIQLMESSFYPAASSVSHSYSSTNLMQMPFESNNIGTFWPPHRSQMRLQSRRSQSREDLSSSVADSHIVKV 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02517 723 Gene3D - 97 245 - -
Trre16g02517 723 MobiDBLite consensus disorder prediction 696 723 - -
Trre16g02517 723 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 80 538 IPR000407 GO:0016787
Trre16g02517 723 Gene3D Exopolyphosphatase. Domain 2 246 522 - -
Trre16g02517 723 Pfam GDA1/CD39 (nucleoside phosphatase) family 101 535 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02517 Trre-Chr16 20792005 20798119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02517 8 723 Nodulin-like Gene Family AT4G19180 56.557 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02517 - - lja:Lj0g3v0174799.1 995.727