Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02516 ATGGTAGCTGGAAATGGTGATATATGGAAAGCTCATACGGCTATGGCAATTGTGCAGTTATTCACCGGTGGTTATCATGTTATTACAAAATTGGCTCTTAATGTTGGAGTCAACCAAATTGTTTTTTGTGTTTTTCGTGATCTTCTTGCTCTCTCTATTCTCGCTCCTATTGCTTTTTTTCGTGAAAGACGTACACGGCCACCCCTAACCAAACGCTTTGTGACATCATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAACCATCTTTTATTTCTTATTGGTTTGAGCTATACTACTCCAACTTATGCTGCTGCAATTCAGCCAGCTACTCCAGTCTTTACATTTGTTTTGGCTATAATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTCTTGCCAAGGTTGGAGGAATTTTTGTCTGTGTTTTGGGTGCTTTGGTGATGGTTTTGTACCGTGGTCCAGCACTTGTAGGGTCTTCAGAAATGGACCTTATATCGCACAGTGAAATAAGTGCCAGAGGTCAACCAGAGCCTTCTGGATGGTTAGTTAGTGGTTTAATGGAACTTGGATTAGACCATTTTCATGTCGGGGTTTTGTGCTTCATAGGAAACTGCATGTGCATGGCTACTTTTCTATCCATTCAGGCTCCATTATTAAAAAAGTATCCTGCAAACCTATCTGTCACAGCGTATTCTTACTTCTTTGGAGCTTTACTGATGGTAACTACATCATACTTTGTGACCGATGAGTCAACTGATTGGAGTTTGACACAGTCTGAAACATTTGCCGTTTTATATGCTGGGATTATTGCATCTGCCCTTAATTATGGAATCATTACATGGAGCAACAAGATCTTAGGCCCAGCCATGGTTGCCCTTTATAATCCACTTCAACCTGGGGCGGCGGCTCTCCTATCTAGAATTTTTATTGGAAGTCCAATTTACATGGGAAGTGTCTTAGGTGGATCTCTGATCATTACTGGTCTGTATGCGGTTACTTGGGCATCATATAGAGAAAGACAGGCAGCTGCTGGAGTTATTTCTCATCATGTCTCGAAATGGGAATCACTTCGCAAGACTTCGTTTCCTAGAATTAATATTTTCTCAGGCTCCTCTAGCTCAAAGCCTTCGGATTGA 1146 0.411 MVAGNGDIWKAHTAMAIVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAFFRERRTRPPLTKRFVTSFFFLGLTGIFGNHLLFLIGLSYTTPTYAAAIQPATPVFTFVLAIMMGTERVNLLRYEGLAKVGGIFVCVLGALVMVLYRGPALVGSSEMDLISHSEISARGQPEPSGWLVSGLMELGLDHFHVGVLCFIGNCMCMATFLSIQAPLLKKYPANLSVTAYSYFFGALLMVTTSYFVTDESTDWSLTQSETFAVLYAGIIASALNYGIITWSNKILGPAMVALYNPLQPGAAALLSRIFIGSPIYMGSVLGGSLIITGLYAVTWASYRERQAAAGVISHHVSKWESLRKTSFPRINIFSGSSSSKPSD 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02516 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 341 - -
Trre16g02516 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Trre16g02516 381 PANTHER WAT1-RELATED PROTEIN 13 343 IPR030184 GO:0016020|GO:0022857
Trre16g02516 381 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020
Trre16g02516 381 Pfam EamA-like transporter family 199 336 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02516 Trre-Chr16 20783390 20789325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02516 94 344 Nodulin-like Gene Family AT5G45370 66.932 2.76e-122 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02516 - - gmx:100809051 637.106