Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g02511 | ATGGCGACAAACACTGTGGCCATTATCGGTCTGCAGACCTCTACAACAGCTCATGTCATATCTCATATAGCAAATGAACTCCAGGTTCCTCTATTATCATTTTCAGCAACTGATCCTACTATCTTTGCTTATGACACTGTTTACGTTCTTGCTCGTTCCCTTGATACATTTTTCAAACAAGGGAACCGAATTACATTTTCACGCGATCCAAAGATATCAGAAATAAGTGGAGACAGCTTGCATCTTTGA | 249 | 0.4016 | MATNTVAIIGLQTSTTAHVISHIANELQVPLLSFSATDPTIFAYDTVYVLARSLDTFFKQGNRITFSRDPKISEISGDSLHL | 82 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g02511 | 82 | Pfam | Receptor family ligand binding region | 3 | 40 | IPR001828 | - | |
Trre16g02511 | 82 | Gene3D | - | 1 | 38 | - | - | |
Trre16g02511 | 82 | SUPERFAMILY | Periplasmic binding protein-like I | 3 | 41 | IPR028082 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g02511 | Trre-Chr16 | 20757832 | 20758080 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g02511 | 41 | 82 | Ion Channels | AT2G32390 | 45.238 | 4.42e-09 | 49.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre16g02511 | K05387 | - | gmx:100812261 | 74.3294 |