Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02497 ATGGAGACTTCAATTACCATTATATGGTTAAACACTCTTCTACTATTTGCACTGCTATTACTTAATACACAAGGACAATTTGTTCCAATAACTCGGCTCGAAAGCGCGGTATCAAAAGGAGCTGTGTGTTTGGATGGAAGCCCTCCAGCTTATCATTTTCATGAAGGACATGAAGAAGGAATTAACAACTGGATTGTTCACATTGAGGGAGGTGGATGGTGTCACAATGTGACATATTGCCTTTATCGTAAGGACAGTCGATTAGGTTCGTCGAATCAAATGGAAGAGCAAACTTATTTTTCTGGCTATTTAAGTGATAACCAAGAATATAATCCAGATTTCTACAATTGGAATAGAGTCAAGATTAGGTACTGTGATGGATCATCATTTACCGGTGATATTGAAGAAGTAGATCCAGAGACAAATTTACACTACAGAGGACAAAGGATTTTTAATGCTGTAATGGAAGAGTTATTAGCAAAAGGAATGGATCATGCTGAAAATGCTATAATTTCTGGATGTTCTGCTGGAGGATTAGCTGCAATATTACACTGTGATGGATTTAGAGAACTATTACCTAATGGAACTAAAGTTAAATGTGTCTCAGATGCTGGTTATTTTGTTAATGTAAAGGATATCTCAGGAGATTATTATATTGAAGATTATTATAGTCAAGTTGTTGAAACACATGGCTCGGAGAAGAATTTGCCACAAACCTGCACTTCAAAACTCAGTCCAGGACTTTGCTTTTTTCCTCAATATATGGCATCAAGTATCAGAACACCTCTCTTCATTGTAAATGCAGCATATGACTCATGGCAGATTAAGAACATTTTGGCACCTGGTGCCGCTGATCCGAATGGCCAATGGAGTAGCTGCAAGACTAATCTAAACAACTGCTCACCTGAACAACTAAATATAATGCAAGACTATAGGGCACAATTCTTGGAGGCATTGAGTCCTATAAGCAACTCTTCATCTAATGGAATGTTCATAGACTCTTGCTATGTCCATTGCCAAACAGAACCACAAGATACATGGTTTACAAGGGACTCTCCAATGGTTGGCAACAAAACAGTTGCAAAGGCAGTAGGAGACTGGTTTTATGAAAGAGATCCTTCCCGTGAGATAGATTGCACATACCCTTGTAACCCTACTTGTCAGAACCGTGTTTTGGATGTTGCAGCCTACCCTGGAATACACTAG 1206 0.3872 METSITIIWLNTLLLFALLLLNTQGQFVPITRLESAVSKGAVCLDGSPPAYHFHEGHEEGINNWIVHIEGGGWCHNVTYCLYRKDSRLGSSNQMEEQTYFSGYLSDNQEYNPDFYNWNRVKIRYCDGSSFTGDIEEVDPETNLHYRGQRIFNAVMEELLAKGMDHAENAIISGCSAGGLAAILHCDGFRELLPNGTKVKCVSDAGYFVNVKDISGDYYIEDYYSQVVETHGSEKNLPQTCTSKLSPGLCFFPQYMASSIRTPLFIVNAAYDSWQIKNILAPGAADPNGQWSSCKTNLNNCSPEQLNIMQDYRAQFLEALSPISNSSSNGMFIDSCYVHCQTEPQDTWFTRDSPMVGNKTVAKAVGDWFYERDPSREIDCTYPCNPTCQNRVLDVAAYPGIH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02497 401 PANTHER NOTUM-RELATED 15 389 IPR004963 GO:0016787
Trre16g02497 401 Pfam Pectinacetylesterase 22 372 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02497 Trre-Chr16 20565128 20571266 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02497 9 400 Carbohydrate Esterase AT4G19420 56.909 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02497 K19882 - gmx:100780707 590.882