Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02495 ATGCACCAATTGTTAAGTGTTGTGATATGTACACTGCTATTATTACTAAAATCAGCTGAAGGGGTTACTGTGCCAATCACTTATGTTCAAAGTGCTGTTGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCATTTTGATAAGGGATTTGAAGGTGGTATTGACAACTGGATTGTTCATTTTGAGGGAGGAGGATGGTGCAACAATGCCACTACTTGCCTTGACCGAGTTAACACTCGTTTAGGATCATCGAAGAAAATGGATACGACACTTTCCTTTTCGGGATTTTTTAGCCCCGGCAAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTATTGTGATGGTTCGTCATTTACCGGTGATGTTGAAGCTGTCGATCCAAAAACCAATTTGCACTACAGAGGAGGAAGGATTTTTGTTGCTGTCATTGAAGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAACGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTTCTATTTTACAATGCGATCGCTTCAAAACTTTACTACCTGCAGCAGCTAAAGTTAAATGCGTCTCCGATGCTGGTTATTTTATCAATGTAAAGTCCGTCTCTGGATCACAACACATTGAACAATTCTACAGTCAAGTTGTTCAAACTCATGGTTCAGCAAAGAACTTGCCTTCATCTTGCACTTCAAGACTCCCACCAGGGCTGTGTTTTTTCCCCGAAAACGTGGCCTCACAAATCAAAACTCCGATCTTCTTTGTAAATGCAGCCTATGATTCTTGGCAGATTAAGAACATTTTGGCACCCGGTGTTGCTGATCCCCATGGCACTTGGAGAAACTGCAAACTTGATATAACTAAATGTTCCTCTAATCAATTAGCTACAATGCAAGGTTTTAGGACAGATTTCTTAAAGGCAATTAGTGTGATTAGTAACTCTCCATCTAAAGGAGCGTTTATAGATGGTTGCTATTCCCACTGCCAAACTGGAATTCAAGAAACATGGATGAGAAGTGACTCTCCAGTGCTGGCCAAGACAACAATAGCAAAGGCAGTAGGAGATTGGTATTATGAAAGAAGGACTTTTCATGAGATAGATTGTCCTTATCCTTGCAACCCTACATGTCATAACCGTGTTTTTGATTAA 1170 0.4017 MHQLLSVVICTLLLLLKSAEGVTVPITYVQSAVAKGAVCLDGSPPAYHFDKGFEGGIDNWIVHFEGGGWCNNATTCLDRVNTRLGSSKKMDTTLSFSGFFSPGKKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHYRGGRIFVAVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFKTLLPAAAKVKCVSDAGYFINVKSVSGSQHIEQFYSQVVQTHGSAKNLPSSCTSRLPPGLCFFPENVASQIKTPIFFVNAAYDSWQIKNILAPGVADPHGTWRNCKLDITKCSSNQLATMQGFRTDFLKAISVISNSPSKGAFIDGCYSHCQTGIQETWMRSDSPVLAKTTIAKAVGDWYYERRTFHEIDCPYPCNPTCHNRVFD 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02495 389 Pfam Pectinacetylesterase 18 369 IPR004963 GO:0016787
Trre16g02495 389 PANTHER NOTUM-RELATED 11 385 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02495 Trre-Chr16 20545551 20549271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02495 1 388 Carbohydrate Esterase AT4G19420 56.738 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02495 K19882 - gmx:100781246 657.521