Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02492 ATGAGGCCACGCAACAATAACAACAACAACAATAACAGATTCATTTTCAATTTCAACAACAACCATTATTCAAGCATCACCGAATCACGGCGACGAAGAATCGCGTTTCCGAAGCGATTATTACTCGATTTAATGGCGGGACAATCAAGGAAATGGATGATCCTTGTTGTTACAATATGGATTCAAGCATTTACAGGAACGAATTTTGATTTCTCGCAATATTCATCGTCGTTGAAATCTGCGCTTGAGATTTCGCAGGTTCAGCTAAATTACTTAGCTACTGCGAATGATATGGGAAAGGTTTTTGGTTGGTCTTCTGGTTTAGCTCTAATGCATCTTCCTGTTTCGGTTGTTATGTTTATTGCTGCTTTTATGGGGTTTCTTGGTTATGGTCTTCAATGGCTTCTTATCAATCATTTCATCTCTTTGCCTTATTTTCTGGTGTTTCTTCTGTGTCTTTTAAGTGGCTGTAGCATCTGCTGGTTCAACACAGTATGTTTTGTGCTCTGCATTAGGAATTTTCCGATTAACCGAACACTTGCATTATCACTTACTGTGAGTTTCAATGGTGTTAGTGCAGCCCTTTACACCCTTGCTGCCAATTCAATAGACCCTTCGTCTGATTCACTGTATCTTCTTTTGAATGCTCTTGTTCCCCTTCTTGTTTGCATTGCAGCAGTTATTCCGATTCTTCGCCAACCGCCTTTAGATCCTCTCCCTCCTGCTGCAGTTAACCGGGACTCACTAATATTTTTAATCTTGAACTTCTTAGCCATTTTCACTGGCCTTTATCTACTCTTGTTTGGCGCATCTGCTTCTTCCGTGGCTTCCTCTCGGCTCCACTTTGGCGCAACTGTTCTTCTCCTCACCCTCCCGTTGTTTATTCCTGGCATTATATATGCTCGTTCGTGGGCTCAGCGTACCATCCATTCCAGCTTTCGGATAGAAGGATCCAGCTTCATTCTTGTTCATGATGATGATCTTGAGCTGCATAAAGAACTACTTAGCCGTCACGGTAGTCTTGTTGGTAATGAAGATGGCAATGGAGATGCTTATTGCCTGCAAAGTGACAATGGATCCATGTTTTCAAGTCGGAAGGAAAGCGATAATGATGTGTGTTGTGAAAGGATGATTGGCCAGGATCAGTTGACAATGCTAGGAGAAGAGCACTCAGCTGCAGTGCTTGTCCGAAGATCAGATTTTTGGCTATACTACATTACATACTTCTGTGGAGGTACAATTGGTCTTGTCTATAGCAATAATCTGGGACAAATTGCTCAATCTTTAGGCCTGCGTTCAAGTACTTCTGCCCTTGTTACTCTATATGCATCCTTTTCGTTTTTTGGCCGCTTGCTTTCAGCTGTACCAGACTATATTCGTAGTAAGTTCTACTTTGCAAGAACTGGTTGGCTCTCCGTCGCACTTATACCAACACCAATTGCGTTCTTCTTGCTCGCTGCATCAGGCACTTCTCTGGCTCTGCATACAGGCACCGCACTAATTGGGTTGAGTTCTGGCTTCATATTTGCAGCTGCTGTTTCAGTTACATCTGAACTGTTTGGACCCAACAGTGTAGGTGTCAATCACAACATTCTCATAACAAATATCCCAATTGGTTCGCTTCTCTATGGTTTTCTTGCCGCACTAGTTTATGATGCCAATGCAGAGTCAACACCGGGAAACTTTACGACGTCTGACTCAGTAGTATGCATGGGAAGGCAATGCTATTTCTGGACATTTGTCTGGTGGGGATGCATATCTGTCCTGGGACTAGGTTCTAGTGTGCTGTTATTCTTAAGAACCAAACATGCATATGAACATTTTGAGAAACACCGTATGTCGACACAAGTTATCGTGTCTTAA 1863 0.4257 MRPRNNNNNNNNRFIFNFNNNHYSSITESRRRRIAFPKRLLLDLMAGQSRKWMILVVTIWIQAFTGTNFDFSQYSSSLKSALEISQVQLNYLATANDMGKVFGWSSGLALMHLPVSVVMFIAAFMGFLGYGLQWLLINHFISLPYFLVFLLCLLSGCSICWFNTVCFVLCIRNFPINRTLALSLTVSFNGVSAALYTLAANSIDPSSDSLYLLLNALVPLLVCIAAVIPILRQPPLDPLPPAAVNRDSLIFLILNFLAIFTGLYLLLFGASASSVASSRLHFGATVLLLTLPLFIPGIIYARSWAQRTIHSSFRIEGSSFILVHDDDLELHKELLSRHGSLVGNEDGNGDAYCLQSDNGSMFSSRKESDNDVCCERMIGQDQLTMLGEEHSAAVLVRRSDFWLYYITYFCGGTIGLVYSNNLGQIAQSLGLRSSTSALVTLYASFSFFGRLLSAVPDYIRSKFYFARTGWLSVALIPTPIAFFLLAASGTSLALHTGTALIGLSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDANAESTPGNFTTSDSVVCMGRQCYFWTFVWWGCISVLGLGSSVLLFLRTKHAYEHFEKHRMSTQVIVS 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02492 620 Pfam Nodulin-like 51 296 IPR010658 -
Trre16g02492 620 Gene3D MFS general substrate transporter like domains 396 611 IPR036259 -
Trre16g02492 620 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 52 606 - -
Trre16g02492 620 SUPERFAMILY MFS general substrate transporter 389 603 IPR036259 -
Trre16g02492 620 Gene3D MFS general substrate transporter like domains 4 237 IPR036259 -
Trre16g02492 620 SUPERFAMILY MFS general substrate transporter 47 299 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02492 Trre-Chr16 20512280 20517377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02492 1 614 Nodulin-like Gene Family AT1G31470 55.502 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02492 - - cam:101496594 1036.17