Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02474 ATGCCAGGGAATAAATACAACGGTGATTCAAATCATATACCGGGTCGTTTAGAAAGGTTATTAAGAGAAAGAGAGTTGAGAAAAAGTGGAAATAGAGGAATTCATCAATCCAATAATGAACAATTGTTGGGTGATGAATATTTGGAGCAGGAGGATCATCAGAAAGATAATGTTGAGAAGGTATCATTATCATCATCATCAACATCATCATCAATAATTGAGAGGAAAGAAGATCATCATAATGATCATGGGAAATATAGACAGAGACTTTTGGTTGTGGCAAACAGGTTGCCCGTGTCGGCAATAAGGAAAGGTGAAGATTCTTGGTCTTTGGAGATCAGTGCAGGTGGCCTAGTTAGTGCTCTCTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCCGGAGTGAATGTTCCAGACGTGGTTGGACAGAAGGCACTCACTAAAGCATTAGCCGAAAAGAGGTGTATCCCAGTATTTCTGGATGAAGAAATTGTTCATCAATATTACAATGGTTATTGCAACAACATCTTATGGCCCCTTTTCCATTACCTTGGACTTCCACAAGAAGACCGTCTTGCAACAACTCGGAGTTTCCAATCTCAATTTTTGGCCTATGAGAAAGCGAATCAAATGTTTGCTGATGTTGTGAACCAACACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTCCCAAAATGCTTAAAGAAATATAACAGTAAAATGAAAGTTGGCTGGTTTCTTCACACCCCTTTTCCTTCTTCTGAAATTCTTAGGACGCTGCCTTCTCGTTCTGAGCTCCTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACGTATGATTATGCAAGACATTTTGTTAGTGCTTGTACTCGCATCCTTGGACTTGAGGGTACACCTTATGGGGTTGAGTATCAAGGGAAGCTAACTCGAGTTGCCGCATTTCCAATAGGGATAGACTCGGAACGATTTATACGTGCACTAGACCTTACTGCGGTGCAGGAGCATATGAAAGAATTGCAAGAAAGATTCAAAGGCAGAAAGGTAATGTTAGGCGTTGATCGGCTTGATATGATTAAAGGAATTCCTCAAAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAAAATGCTTATTGGCGTGATAAAGTAGTTTTGCTTCAAATCGCTGTCCCAACAAGAACAGATGTTCCTGAATATCAAAAGCTTACAAGTCAGGTTCATGAAATTGTTGGTCGAATCAATGGAAGATTTGGATCATTGAATACTGTTCCTATACATCACCTGGATCGCTCTCTTGACTTTCAAGAACTATGTGCTTTGTATGCAGTTACTGATGTAGCGCTAGTCACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCCCAGTCTCTTGGTGCTGGGGCGATTCTCGTCAATCCGTGGAACGTTACAGATGTTGCTGCTGCAATTGGAAGAGCTCTGAATATGCTACCTGCGGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTGAAATCCCATACTGCACAAGAATGGGCAGGAACGTTTGTAAGTGAACTAAATGATACTGTTATTGAGGCACAACTAAGGACACGACAAGTTCCGCCTAGGCTTCCAACCGACATTGCAATCAGGCGTTATCTGCACTCAACTAATAGATTGCTCATTTTGGGATTCAATGGAACTTTAACTGAACCAGTTGAAAAAACTGGAGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCAGAATTGAGACAACCCTTGACAGCGCTTTGCAGTGATCCAAATACCACAGTAGTTGTTCTCAGTGGAAGTGGCAGAAAAGTCCTAGATGATAACTTCAAAGAATACGACATGTGGTTGGCAGCAGAGAACGGTATGTTTTTACAGCCTTCAAAGGGTGAATGGATGACAACAATGCCAGAACATCTGAATATGGAATGGGTCGACAGCATAAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCACGATCACATTTTGATTTCGAAGACAGGGAAACTTCACTTGTTTGGAATTACAAATATGCAGATGTCGAGTTTGGTAAACTTCAAGCAAGAGACATGCTGCAACATCTCTGGACTGGTCCGATTTCTAATTCGTCAGTTGAAGTTGTTCAAGGGAGCCGATCTGTTGAAGTTAGAGCTGTTGGTGTTACAAAGGGAGCCGCTATTGACCGCATCCTGGGTGAGATAGTTCATAGCAAATCCATGACATCACCAATTGATTATGTTCTTTGTATAGGACATTTTCTCGGCAAGGATGAAGATCTTTATACCTTTTTTGAGCCGGATCTTCCATCTATTGGTGTGAGTCTTCCGCGAAGTAAGTCAACAACAGAAGCAGTTAAGTTTCCTGCTGAGAAGAAGCCAGCTTTAAAGATCCCAGCTAGTAGTAAAAATGGACCAAAATCATTATCTCAAAATAAGGTACAAAAACCAGTCTCAAATTCTGATCAAAAGAAAACAAATAATCAAATTTGCAGTTCAACACGACGCCCTGCTCAAGAAAATACATCATGGAACGTCCTTGACCTCAAGAAAGATAATTACTTCTCATGCGCTGTTGGGAGAAACCGAACGAATGCTCGGTATACTCTTGCCTCACCAGATCATGTTGTAGAGTTTCTGATGGAACTAGCGGATGCATTACCGCACTCTTTACTACAAAGTTAA 2799 0.4084 MPGNKYNGDSNHIPGRLERLLRERELRKSGNRGIHQSNNEQLLGDEYLEQEDHQKDNVEKVSLSSSSTSSSIIERKEDHHNDHGKYRQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDVVGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFLAYEKANQMFADVVNQHYEEGDVVWCHDYHLMFLPKCLKKYNSKMKVGWFLHTPFPSSEILRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLTAVQEHMKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLNTVPIHHLDRSLDFQELCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNVTDVAAAIGRALNMLPAEREKRHKHNFLHVKSHTAQEWAGTFVSELNDTVIEAQLRTRQVPPRLPTDIAIRRYLHSTNRLLILGFNGTLTEPVEKTGDQIKEMELKVHPELRQPLTALCSDPNTTVVVLSGSGRKVLDDNFKEYDMWLAAENGMFLQPSKGEWMTTMPEHLNMEWVDSIKHVFEYFTERTPRSHFDFEDRETSLVWNYKYADVEFGKLQARDMLQHLWTGPISNSSVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDLYTFFEPDLPSIGVSLPRSKSTTEAVKFPAEKKPALKIPASSKNGPKSLSQNKVQKPVSNSDQKKTNNQICSSTRRPAQENTSWNVLDLKKDNYFSCAVGRNRTNARYTLASPDHVVEFLMELADALPHSLLQS 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02474 932 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 336 538 - -
Trre16g02474 932 MobiDBLite consensus disorder prediction 54 81 - -
Trre16g02474 932 Gene3D Glycogen Phosphorylase B; 337 537 - -
Trre16g02474 932 Pfam Glycosyltransferase family 20 89 554 IPR001830 GO:0003824|GO:0005992
Trre16g02474 932 Pfam Trehalose-phosphatase 592 811 IPR003337 GO:0003824|GO:0005992
Trre16g02474 932 CDD HAD_TPP 587 806 - -
Trre16g02474 932 Gene3D Glycogen Phosphorylase B; 79 336 - -
Trre16g02474 932 MobiDBLite consensus disorder prediction 833 875 - -
Trre16g02474 932 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 88 556 - -
Trre16g02474 932 FunFam Alpha,alpha-trehalose-phosphate synthase 610 685 - -
Trre16g02474 932 CDD GT20_TPS 89 554 IPR001830 GO:0003824|GO:0005992
Trre16g02474 932 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 81 335 - -
Trre16g02474 932 SUPERFAMILY HAD-like 586 921 IPR036412 -
Trre16g02474 932 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 676 758 - -
Trre16g02474 932 Gene3D - 676 758 - -
Trre16g02474 932 MobiDBLite consensus disorder prediction 841 875 - -
Trre16g02474 932 Gene3D - 589 772 IPR023214 -
Trre16g02474 932 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 76 923 IPR001830 GO:0003824|GO:0005992
Trre16g02474 932 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 89 554 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02474 Trre-Chr16 20371088 20382170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02474 1 923 Trehalose Biosynthesis Gene Families AT1G78580 75.953 0.0 1435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02474 K16055 - gmx:100797320 1560.43