LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre16g02392	ATGAGTTTCACTATGAGCTACTGCAGCAGTAACACTCTTCGCCTTCAATCTTGCACAATCCTAAACTGCAATTCTCAGCAACATGGCAGGCATATTGTTCCCACCAATGCGCTCAAAAAACCTACTGAACGTGAAATTTCTCTTCAGTCAAAGTTGAAGATTAATGGCAACAGTGTTATGACATTCATTGGTGGAATCACAGCGGCACAATTGGTTGCTCCAGCCACTGCAAAAGCTGAAATGGCTGCTTCTTTTTTTACTTTGGCTGATGGTAGTCTCGGTGACTGGTTTGGAGGCATTCTATTTTCAGCAGGACAACAGGCCAATGAAGCAGTTCTGGATCAACTATCGTCCCTAAGCTTCACTAGTTTGGCTGTAATTTATGGGGCAGGACTTGTAACCAGCCTTTCTCCCTGTACACTTAGCGTGTTACCACTGACTCTCGGTTATATTGGGGCATTTGGCTCTGGTAAAAGCAGAGGACAGGTCATTGGAGATTCCATTGCATTTTCCTTGGGTCTCGCAACCACATTAGCACTACTGGGTGTGGGAGCATCATTTGCAGGAAAGGCTTATGGACAGATTGGCCAAGGATTACCTTTGGCTGCTTCTGGTTTGGCTGTAATTATGGGTCTGAACCTTCTTGAGATAATTGAATTAACGCTCCCCTCATTCTTCGAAAGTTTTGATCCACGTTCAGTGGCTGCCAATTTTCCATCAAGTGTGCAAGCATACCTTGCCGGGCTTACATTTGCATTAGCTGCCTCACCCTGCAGTACACCTGTTCTTGCTACTCTTCTTGGATATGTCGCTGCATCTAAGAATCCAGTAATCGGAGGCAGCTTGCTTCTGACATACACAACAGGTTACATTTCTCCATTACTTTTGGCTGCATCTTTTGCTGGAGCGTTACAGAGCTTGCTTTCATTTCGCAAGTACTCAGCATGGATCAATCCTATAAGCGGAGCAATGTTGTTAGGAGGCGGTGTATATACCTTCTTAGATAGGCTTTTCCCAGCCACAACAATGGCAATGTAG	1038	0.4499	MSFTMSYCSSNTLRLQSCTILNCNSQQHGRHIVPTNALKKPTEREISLQSKLKINGNSVMTFIGGITAAQLVAPATAKAEMAASFFTLADGSLGDWFGGILFSAGQQANEAVLDQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELTLPSFFESFDPRSVAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPISGAMLLGGGVYTFLDRLFPATTMAM	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre16g02392	345	Pfam	Cytochrome C biogenesis protein transmembrane region	128	334	IPR003834	GO:0016020\|GO:0017004
	Trre16g02392	345	PANTHER	CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED	118	345	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre16g02392	Trre-Chr16	19820190	19824618	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre16g02392	27	345	Chloroplast and Mitochondria Gene Families	AT5G54290	71.772	3.94e-144	410

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre16g02392	-		-	mtr:25502555	564.688