Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02377 ATGGCGGATGCTGCTATCTCGATTGTGGCTAGTTTGGTTGAACGTTTGGTAGGACCGGCAATACGCGAAGGAAGATGTTTTCTTTGCGTTAATAAATTTATCAGGGATCTTGAGAATGAAAAGAAAGGGCTGGTAATTGAAAGAGATAACTTGTTGGATCGTGTTGAACAAGCCAAGCATAGAACTGAAGAAATTGAGAAACCGGTGGAAATGTGGCTAAATGATGTGAAAAATCTATTGGAACAGGTTGAAGATTTAGAACAGATGATGAGCTCAGATACTAGTTGTTTTCAAGGACAGTGTCCAACTTGGAAAAGATACCGTCTATGCAAGCAAATAGTAAAGAAGATAGAGGCAATAGGAAAATTCAAAGGAAAAAGCAATATTCAGCCGTTTTCTCACCGTGCTCCTCTTCCCGGCATACAGTTGCCATCATCAGAGAACTTTACTTATTTTGAATCAACAAAAGTTGCTTATAGTGAACTATTGGAGGCACTTCAAGATGATGACATTTACATGATTGGAGTGTATGGAATGGGCGGAACAGGGAAGACAACTCTTGTAACAGAAGTGGCTAAGGAGGTTGAAGCATCAAAGATTTTTGACAAGGCTATATTAATTACAGTGTCTCAAACTCCAAATATTAGAGATATTCAAGGAAGAGTAGCTGATTTTTTGAACTTGAAATTGGAGGAAGAAAGTGATGAGGGAAGAGCACAACGTCTCTGGTTGAGTTTGAAAGAAAAAAAGAGGACGCTCATAATAATAGACGACTTATGGAGAGATTTTAATTTGAGGGATATAGGGATTCACTTGGACAACGATAACAAGGGTGCATGGAAGATCCTTGTAACCACTCGCAATCAACATGTATGTGATTTGATGCATTGTCAAAAGAAGATTCATCTAGAACTCTTATCTGAAGATGAGTCTTGGACTTTGTTCAAAAAACATGCACATATTGATGAAGAATTCTCCAAGTCATTGGATGGTGTGCCACAAAAAATTTGCCGCGAATGTAAAAGACTACCTATAGCAATCAAAGCGGTGGGATCTTCTTTGAAAGGAAAATCTGATGCTGAATGGAAGGTGGCATTTCACAGGTTGACACATACAGAAACCATTGACGATCATATGGACGGAGTGGGAGATGCTTTAAGTTGTCTGAAATTAAGCTATGATTATTTATCTTACAAAGAAAAGCTTATCTTCTTAATGTGTTCTATGTTTCCAGAAGATTATAAAATCTCAATAGAAGATTTGATCCGATATGCAGTGGGACTTGGACTAGGAGGAGAATTTCCACTAGACTCAGCAAGAGATGAGATCGAAGCAACGATGAACAGACTTTTGCAATCATGTTTGTTGATGCATACTGGGGAAAGCAAAGAGTGCGTGAAGATGCACGACACAGTTCGCGACACAGCCTTATGGATTGCAAAGAGATCAGAGAATCACAAAATCGTGGTAAATGTTGACAAACAAGTTAGCAAATTGGTAATGGATGACAATATAAGAGATTGTTTTGCGCTATCCTCGTGGTATGACAAGCAAGATCAAAACTTTCATCAATTAGATGCTCCAAACCTTGAAATTCTATTGGTACATTCTAGGAGAAGGAAATTCTTTGATTTATCCCATGCAACCTTTCAAGGAGTGAAAGGGCTGAAGGTTTTTTCTCTAAACTATAATGGATATGGTGATCCATCGTTATCATTGCCATCTTCAAGTCCATTGACAAATCTTCGAACTCTGCGCTTGAATGGATGGAAATTAGATAACATTCTTTTCATAACAAACTTAACAAGACTTGAGATTCTTGACTTGCAACATTGTATCCTCAATGAACTTCCTAAGGAAATAGGAAAACTCAATAGATTGAAGCTTCTAGATTTGTCATATTGTCGTTTTCTTCAAGAAAACTATAATGCAGCAATAGGGAAATTGTCAAAATTGGAAGAGTTATATGCTTTCAAATGCATGCCAAAAGAGTACATTTATCAGTGTGCTATGGACATTATTACTCTTCCAAGGTTGCAAAGGTTCATAATACATACTGACCTTAGTAGAGATTTTGCAAAAACCTCGAGACATATAGAAGTAAAGGATTTTACTATCTCCAATATGAAGGCTTCTACAAAGAAACTTCTTCAAATAGCCGAAACACTTCATTTGATAAATCTTCATGGAGGATGTAAGAGTATCATGCCAGACATGATTGGAGTTATGGGAGGTGTGTGTTGTTTTAAGTCTCTCTGTCTTGAGGGTTGCTCAGAGATAGAATGCATCTTCAATACAGCCTCTGATTCCGAGCTAGTGGCTCCTGAGTTGCTGGAATTAGTACTGCTAGGATTGGAAAACTTGGAAGAATTGTGTCGTGGTACACCTCTACACGTGCTAAGGTTCTTTGAGAGATTAGAAAAACTTGAAATACAACAATGTTTGAAGTTACACAATATATTTCCACGGGACTGTAGCTTACGAAATCTTAAAGTCCTCAAAATAGCAAACATCGTGTTCGGTGAAGCTCTCTTCTCGATATCTGTTGCCCGCAGTCTTCAACAACTTGAAGTGCTAGAAGTAGAGCAGTGTAATGAACTTAAGCTTATAATTGCCACCGGAAGTGAGCTTGGTTCTAATTCAGACAATGAAATATTTCAGACCTCTCTAACAAGTTCTCATTTCGTGATGTCTAGATTGAAGAAACTTCACATTTCTAAGTGTAAGAAGTTAGAGTCATTATTACCAATCTGTTGTGTTGAAGGACTTGCACCACTGGAAGAGATACAAATAAAGAAGGCTCCTCAGTTGAAACTTGTATTTGGTGAATGTGATCACCAGAGTCATTCATCTCAACAATATCAAAATCAAAACTTGCATCCTTATTTGAAACGTCTCAAACTCACAGATCTTGATAATCTCATCGGAATATGTCCTGAAAACAATTGTGAAAAATGGCCTTCTTCGATAGTACTAATTGTGGAGAAATGCCCAAAGTTGAATGCATCATGGATCGCTACATTGGCCGGCTCTGAGGATAGAGAAAAAGCTGTCAAGATAGAAAAAATAACCTTAAGAGGTTTTTCTGGATTGAGCCTCATATCAAGGGTAGGTCCTTCTCCAAGACATATTTTGAGTCTTAATTGTCTGCAACGATTAGCAGTGAGCAATTGTAATAACTTGAGATCTCTATTCTCAATGGAGTTACATAGAAGCCTACCTGAGTTGACAACGTTTCGAGTATACTCCTGCCATGAGTTAGAACAAATCATTGAAGAAAATGAAAAGTTAGTGTCCAATACTGAAGTGTGTTTTCCAAAGCTAAAAGATATAAAAATTCAAAATTGCAAAAAAATGAAAAGTCTTTTCTCTGTTGCTATGATTAGAATGCTTCCAAAGTTAAGCACTCTTGAAATGTCAGAGGTTACTCAACTAGAAGAAGTTTTTAAGGGAGGCAACACTATCATCAATGATGTTGAAATGGGACTTGTAAACTTATCCAAAATTGAACTGCATAAGTTGCCAAGTTTTGTTGATATTTGCAAGGGTTTTAAGTTACAGACTCCGAAAATTAAACATCTCGACATAGTTGAATGCCCGAACATATCTCCAAGTTTGAGAGAAATTCAGGTAAATACTCCTCTACAAACAAGTTTTATTGACACAAATTCTCTATAG 3678 0.3722 MADAAISIVASLVERLVGPAIREGRCFLCVNKFIRDLENEKKGLVIERDNLLDRVEQAKHRTEEIEKPVEMWLNDVKNLLEQVEDLEQMMSSDTSCFQGQCPTWKRYRLCKQIVKKIEAIGKFKGKSNIQPFSHRAPLPGIQLPSSENFTYFESTKVAYSELLEALQDDDIYMIGVYGMGGTGKTTLVTEVAKEVEASKIFDKAILITVSQTPNIRDIQGRVADFLNLKLEEESDEGRAQRLWLSLKEKKRTLIIIDDLWRDFNLRDIGIHLDNDNKGAWKILVTTRNQHVCDLMHCQKKIHLELLSEDESWTLFKKHAHIDEEFSKSLDGVPQKICRECKRLPIAIKAVGSSLKGKSDAEWKVAFHRLTHTETIDDHMDGVGDALSCLKLSYDYLSYKEKLIFLMCSMFPEDYKISIEDLIRYAVGLGLGGEFPLDSARDEIEATMNRLLQSCLLMHTGESKECVKMHDTVRDTALWIAKRSENHKIVVNVDKQVSKLVMDDNIRDCFALSSWYDKQDQNFHQLDAPNLEILLVHSRRRKFFDLSHATFQGVKGLKVFSLNYNGYGDPSLSLPSSSPLTNLRTLRLNGWKLDNILFITNLTRLEILDLQHCILNELPKEIGKLNRLKLLDLSYCRFLQENYNAAIGKLSKLEELYAFKCMPKEYIYQCAMDIITLPRLQRFIIHTDLSRDFAKTSRHIEVKDFTISNMKASTKKLLQIAETLHLINLHGGCKSIMPDMIGVMGGVCCFKSLCLEGCSEIECIFNTASDSELVAPELLELVLLGLENLEELCRGTPLHVLRFFERLEKLEIQQCLKLHNIFPRDCSLRNLKVLKIANIVFGEALFSISVARSLQQLEVLEVEQCNELKLIIATGSELGSNSDNEIFQTSLTSSHFVMSRLKKLHISKCKKLESLLPICCVEGLAPLEEIQIKKAPQLKLVFGECDHQSHSSQQYQNQNLHPYLKRLKLTDLDNLIGICPENNCEKWPSSIVLIVEKCPKLNASWIATLAGSEDREKAVKIEKITLRGFSGLSLISRVGPSPRHILSLNCLQRLAVSNCNNLRSLFSMELHRSLPELTTFRVYSCHELEQIIEENEKLVSNTEVCFPKLKDIKIQNCKKMKSLFSVAMIRMLPKLSTLEMSEVTQLEEVFKGGNTIINDVEMGLVNLSKIELHKLPSFVDICKGFKLQTPKIKHLDIVECPNISPSLREIQVNTPLQTSFIDTNSL 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02377 1225 Coils Coil 69 89 - -
Trre16g02377 1225 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1038 1202 - -
Trre16g02377 1225 Pfam NB-ARC domain 162 394 IPR002182 GO:0043531
Trre16g02377 1225 PRINTS Disease resistance protein signature 173 188 - -
Trre16g02377 1225 PRINTS Disease resistance protein signature 340 354 - -
Trre16g02377 1225 PRINTS Disease resistance protein signature 622 638 - -
Trre16g02377 1225 PRINTS Disease resistance protein signature 246 260 - -
Trre16g02377 1225 FunFam Probable disease resistance protein At1g61300 149 300 - -
Trre16g02377 1225 Gene3D - 305 391 IPR042197 -
Trre16g02377 1225 Gene3D - 392 477 IPR036388 -
Trre16g02377 1225 Coils Coil 34 61 - -
Trre16g02377 1225 Gene3D Ribonuclease Inhibitor 508 932 IPR032675 -
Trre16g02377 1225 Coils Coil 635 655 - -
Trre16g02377 1225 Gene3D Ribonuclease Inhibitor 1041 1218 IPR032675 -
Trre16g02377 1225 Gene3D - 136 302 IPR027417 -
Trre16g02377 1225 SUPERFAMILY L domain-like 467 1145 - -
Trre16g02377 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 407 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02377 Trre-Chr16 19647471 19651254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02377 159 561 WRKY Transcription Factor Family AT5G45050 24.221 5.24e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02377 - - cam:101506740 1214.13