Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02372 ATGGAAAGTAAAAATCAACTCCAAGTTTCAAATGCAGGGCAACAAAATGGAGGAACCAATTTTTTCAAAACTTGTTTCAATGTACTCAATACCTTGACAGGTATTGGAATACTCTCAATACCATATGCAGTTTCTCAAGGAGGGTGGTTGAGTTTTATGCTTCTAATTATTTTTGCTATGATAAGTTGTTACACAGCTTTACTATTGGAAAGGTGTATGAATCTAAATCCAAAAATCAAATCTTATGCTGATATAGGTGAGGTTGCATTTGGTCACAAAGGAAGAGCTATGATAGCTATTTTCATATATTTAGAGGCATTTTTAATTTCTGTGGAGCTACTTATTTTAGAAGCTGACAATTTGGAAAAGCTTTTTCCAAATATGAGATTAACTATATTTGGTCTTGAAATTGAAGGTAAAAGTTGTTTTGTGATTATCACTGCTTTGGCAATATTACCAACAACATGGTTGAGAAATTTGGGAGCTCTAGCCTATATTTCAATTGGTGGAGTATTTACTTCAATTATTTTAATTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTTGGATTTCATGAAAGGGGGCATTTGATACATTGGGGTGGATTGTCAACTTCTATGAGCATTTTTGCATTCTGTTTCAGTGCTCATTCATTAATGCCTACTATATGTAATTCCATGAGTGACAGAAAACAATTTTCTAAGGTTTTGTTGATTTGCTTTGTGGCAAGCACTATTATTTATGGAACTATTGTTGTTTTAGGCTATATGATGTTTGGAGAACATTTGAAGTCTCAAATCACATTAAATTTACCTACAAACACTATAAGTACTAAAATAGCAATCTATTCCACAGTAATTAATCCTTTCACTAAGTATGCTATTGAAATTAGCCCAATAACAATTGCAATTGAAGACAAGTGGCATCAATGCATGACAAGACCAATTAGCATTTTAGTCAGAACAATCATTGTTGCAAGCAGTGTACTTGTGGCACTATACATTCCATTTTTTGCATACATTATGGCGTTTATTGGTGCATTCTTGAGTGTAGCAATCACATTGTTGTTTCCATGTCTTTGTTACCTAAAGATAAATAAAGCTGCTAAGAAAATTGGATTAGAGCTTATCACCATCATGGGAATTCTGATCATTGGAACGTTTATTGGAATACAAGGGACCTACAATTCAGTGGAGAAAATAGTAAATCAAATGAAGCTTTGA 1227 0.335 MESKNQLQVSNAGQQNGGTNFFKTCFNVLNTLTGIGILSIPYAVSQGGWLSFMLLIIFAMISCYTALLLERCMNLNPKIKSYADIGEVAFGHKGRAMIAIFIYLEAFLISVELLILEADNLEKLFPNMRLTIFGLEIEGKSCFVIITALAILPTTWLRNLGALAYISIGGVFTSIILIGCVVWVGEVDGVGFHERGHLIHWGGLSTSMSIFAFCFSAHSLMPTICNSMSDRKQFSKVLLICFVASTIIYGTIVVLGYMMFGEHLKSQITLNLPTNTISTKIAIYSTVINPFTKYAIEISPITIAIEDKWHQCMTRPISILVRTIIVASSVLVALYIPFFAYIMAFIGAFLSVAITLLFPCLCYLKINKAAKKIGLELITIMGILIIGTFIGIQGTYNSVEKIVNQMKL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02372 408 PANTHER AMINO ACID TRANSPORTER 12 389 - -
Trre16g02372 408 Pfam Transmembrane amino acid transporter protein 19 397 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02372 Trre-Chr16 19605253 19607336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02372 1 406 Amino Acid or Auxin Permease AAAP Family AT3G28960 45.232 4.38e-135 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02372 K15015 - gmx:100812006 570.081