Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02371 ATGGAGATTAAAGTTTCAAATGCAGGACAACAAATTGGAGGAACCAACTTTTTCAAAACTTGTTTCAATGTACTCAATGCCTTGACAGGTATTGGAATACTATCAATGCCATATGCAATTTACCAAGGAGGGTGGTTAAGTATTATGCTGCTAATTATTTTTGGGATGATATGTTGCTACACAGCTTTACTTTTGGAAAGGTGTATGAATGCACATCAAAGTATCAAATCTTATGCTGATATAGGTGAGGTTGCTTTTGGGTACAAAGGAAGAGCTATCATAGCAATTTTCATATACATTGAGTTGTTTTTAGTTGCGGTGGAGCTTCTTATATTAGAAGGAGACAATTTGGAGAAACTTTTCCCAAATATGGGACTCACAATATGTGGCCGTAGAATTGATGGTAAAAGTTGTTTTGTGATTATCACTGCTTTGGCAATATTACCAACAACATGGTTGAGAAACTATGGAGCTCTAGCTTATATTTCAATTGGTGGAGTATTCACTTCAATTATTTTAATTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTTGGATTTCATGAAAGAGGACATTTGATACATTGGGGTGGATTGTCTACTTCTATGAGCATTTTTGCATTTTGTTACAATGCTCATGCATTAATGCCCACAATTCTCAATTCCATGAGTGACAGAAAACAATTTCCCAAGGTTGTTTTCGTTTGCTTTGTGGTAAGCGTTGTTATCTACGGAACTATTGCCGTTTTAGGCTACACAATGTTTGGAGATGATTTGAAGTCACAAATAACATTAAATTTACCCACAAAAACTACAAGTACTAAATTAGCAATCTATTCTACAATAATTAATCCTTTCACTAAGTATGCTATTATAATCAGCCCAATAACAATTGCTATTGAGGAAAAATGGAATTTATGCAAGAGTAGAGCTATTAGCATTCTAGTTAGAACAATCATTGTGGCTAGTAGTGTACTTGTGGCACTATACATTCCTTTTTTTGCTTACCTTATGGCGTTTATTGGTTCATTCTTGAGTGTAGCAATCTCATTGTTGTTTCCTTGCCTTTGCTACTTAAAGATAAACAATGCTACTAAGAGTTTTGGATTAGAGCTTATAATCATCATGGGAATTCTTCTCGTTGGTATACTTATGGGAATATGTGGTACCTACATTTCAGTGGAGAAAATAGTAAATATAATGAAACATTGA 1215 0.3465 MEIKVSNAGQQIGGTNFFKTCFNVLNALTGIGILSMPYAIYQGGWLSIMLLIIFGMICCYTALLLERCMNAHQSIKSYADIGEVAFGYKGRAIIAIFIYIELFLVAVELLILEGDNLEKLFPNMGLTICGRRIDGKSCFVIITALAILPTTWLRNYGALAYISIGGVFTSIILIGCVVWVGEVDGVGFHERGHLIHWGGLSTSMSIFAFCYNAHALMPTILNSMSDRKQFPKVVFVCFVVSVVIYGTIAVLGYTMFGDDLKSQITLNLPTKTTSTKLAIYSTIINPFTKYAIIISPITIAIEEKWNLCKSRAISILVRTIIVASSVLVALYIPFFAYLMAFIGSFLSVAISLLFPCLCYLKINNATKSFGLELIIIMGILLVGILMGICGTYISVEKIVNIMKH 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02371 404 PANTHER OS05G0424000 PROTEIN-RELATED 22 384 - -
Trre16g02371 404 Pfam Transmembrane amino acid transporter protein 15 393 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02371 Trre-Chr16 19593688 19596392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02371 2 399 Amino Acid or Auxin Permease AAAP Family AT3G28960 45.387 3.12e-133 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02371 K15015 - gmx:100812006 552.362