Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02360 ATGTGGTACAAAAACTTAACCCCTTTAACAATTGTATGGGTGGCCAACAGAGAAACACCACTGCACAATAATTTAGGAGTTTTTAAACTCAATCAAAATGGGGTTCTTGTGATTCTCAATGGCACAAACAACACCATCTGGTCCTCGAATGTGTCAAACAAACCCGCGAATAATTCAATAACTGCACAGTTATTGGACACAGGAAATCTTGTGTTGAAAATTGGGCAGGACAATGTTTTGTGGCAGAGTTTTGATTATCCGTGTGATACATTATTGCCGGGAATGAAGCTTGGATGGAACTTAGTAACCGGTCTAAATATGTTCGAATCGTCTTGGAAAAGTTTAGATGATCCAGCTAAGGGAAATTATTCTGTAAATATTGATATCAGAGGATTTCCGCAACTAGTTATAATGAAGGGATCTGTCATACAATTGAGAGTAGGATCATGGAATGGACGCACTTTTACCGGATATCCAACACAACCATTGAAACAAAAGCAAAGATTTGAATTTGTCATGACTGAAAAAGAAGTGTATCATCGGTATGAAGTTGTTGATAGCTCTGTTGTTTCAATATATAAACTCTCTCCTTTAGGAAATTTGCAGGCTTTAGTTTGGACAAGTGAAACAAGCGATAGGATAGTTGTCGACACTGGTATGGAAGATTCTTGTGACAGCTATGCAACATGTGGAGCAAATTCTGTATGCAATATGAATGGAAATGTTCCGAGATGTGAATGCCTAAAAGGTTATGTTCCTAAGTTTCCTGAACAATGGAATATTTCATATTGGTCTAGTGGTTGTGTTCCGAAAATTAAGTCATTTTGTGGAAACAATAACACAAGTGGTTTCTTGAAATACCGAGAAATGAAATTGCCAGACACGTCTTCATCATGGTACAATAAAACCATGAACCTAGTGGAATGCCAAAAAGTGTGTATGAAAAATTGTTCGTGTACGGCTTATACAAATGTGGATATCCGAAATGGAGGAAGTGGTTGTGTGCTTTGGTTTGGTGATCTAGTTGACATGAGAGTATTTTCTCAATGGGGACAAGATCTTTATATCAGAGTCCCTTCATCAGAATTGGATCATGTTAGTGTTAATGGCAACGGAAACCAGAAGAAGCGACTGATACGGATCACTGTTGCTGTAATAATTTCTGGATTCTTAATATGTGCCTGCATAATAATATTTATAAAGCGAGTGGCACCGAGATTATATCATCTTGCACCATTTCAATGGAGGCAACAATATTTTAGATTGAGAAAGGAAGATTCTGATCTGCCAATATTTGATTTTTCAATCATTGTCAAGGCAACTGATAGTTTTGCTAGCAGAAATAAACTTGGAGAAGGTGGATTTGGACCTGTTTATAAGGGTACCCTTATAGATGGTAAAGAGGTAGCCATAAAGCGCAACTCAAAGATGTCTGATCAAGGGTCGGAGGAATTTAAAAACGAAGTTTTGTTGATTGCAAAACTTCAGCACCGTAATCTTGTGAAGCTTCTTGGTTGTTGTATTCATAGAGAGGAAAAATTGTTGATCTACGAATACATGCCCAACAGGAGCTTAGACTACTTCATCTTTGATGAAACTAGAAGCAAACTCTTGGACTGGTCGAAGCGTTCCCAGATTATTGCTGGCATAGCTAGAGGACTTCTTTATCTCCACCAAGATTCTAGACTTAGAATTATTCACAGAGATTTAAAGTTAAGCAATATCTTGCTAGATGCCCATATGAATCCAAAAATATCAGATTTTGGTCTGGCTCGGACATTTTGTGGAGATCAAGTTGAAGCCAGAACAAGAAGATTGGTTGGAACATATGGCTACATGCCTCCAGAGTATGCTATGCATGGCCGATACTCCATGAAATCAGATGTGTTTAGTTTTGGAGTAATAGTATTGGAGATAATTAGCGGAAAAAAGGTGAAGGTGTTTTATGACTCAGAACACTCACTCAACCTTCTTGGACATGCATGGAGACTGTGGATTGCAAACATGCCACTGGAACTAGTTGATCCACACTTACTTGAGACAATCCTTTATTCTGAAATATTAAGATATATGCATGTGGGATTGTTGTGCGTACAAGAAAAACCGGGAGATAGACCAGACATGTCATCTGTAATTCTAATGCTGAATGGTGAGAAATTATTGTCTCAGCCGAAAGCTCCGGGATTTTATACTGGAAGGGGCTTACCTGAGCCAATATCGCCATCTTCAAATCAGATGTCTATTACAACTTTTGAGGCAAGATAG 2265 0.3823 MWYKNLTPLTIVWVANRETPLHNNLGVFKLNQNGVLVILNGTNNTIWSSNVSNKPANNSITAQLLDTGNLVLKIGQDNVLWQSFDYPCDTLLPGMKLGWNLVTGLNMFESSWKSLDDPAKGNYSVNIDIRGFPQLVIMKGSVIQLRVGSWNGRTFTGYPTQPLKQKQRFEFVMTEKEVYHRYEVVDSSVVSIYKLSPLGNLQALVWTSETSDRIVVDTGMEDSCDSYATCGANSVCNMNGNVPRCECLKGYVPKFPEQWNISYWSSGCVPKIKSFCGNNNTSGFLKYREMKLPDTSSSWYNKTMNLVECQKVCMKNCSCTAYTNVDIRNGGSGCVLWFGDLVDMRVFSQWGQDLYIRVPSSELDHVSVNGNGNQKKRLIRITVAVIISGFLICACIIIFIKRVAPRLYHLAPFQWRQQYFRLRKEDSDLPIFDFSIIVKATDSFASRNKLGEGGFGPVYKGTLIDGKEVAIKRNSKMSDQGSEEFKNEVLLIAKLQHRNLVKLLGCCIHREEKLLIYEYMPNRSLDYFIFDETRSKLLDWSKRSQIIAGIARGLLYLHQDSRLRIIHRDLKLSNILLDAHMNPKISDFGLARTFCGDQVEARTRRLVGTYGYMPPEYAMHGRYSMKSDVFSFGVIVLEIISGKKVKVFYDSEHSLNLLGHAWRLWIANMPLELVDPHLLETILYSEILRYMHVGLLCVQEKPGDRPDMSSVILMLNGEKLLSQPKAPGFYTGRGLPEPISPSSNQMSITTFEAR 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02360 754 Pfam Protein tyrosine and serine/threonine kinase 447 652 IPR001245 GO:0004672|GO:0006468
Trre16g02360 754 PIRSF SRK 1 754 IPR024171 GO:0004674
Trre16g02360 754 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 276 358 - -
Trre16g02360 754 MobiDBLite consensus disorder prediction 734 754 - -
Trre16g02360 754 CDD PAN_AP_plant 276 359 - -
Trre16g02360 754 ProSiteProfiles EGF-like domain profile. 220 257 IPR000742 -
Trre16g02360 754 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 1 705 - -
Trre16g02360 754 SMART blect_4 1 87 IPR001480 -
Trre16g02360 754 SUPERFAMILY Protein kinase-like (PK-like) 427 721 IPR011009 -
Trre16g02360 754 Gene3D Transferase(Phosphotransferase) domain 1 520 725 - -
Trre16g02360 754 SUPERFAMILY alpha-D-mannose-specific plant lectins 9 118 IPR036426 -
Trre16g02360 754 ProSiteProfiles Protein kinase domain profile. 444 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g02360 754 Gene3D - 1 84 IPR036426 -
Trre16g02360 754 MobiDBLite consensus disorder prediction 737 754 - -
Trre16g02360 754 CDD B_lectin 1 87 IPR001480 -
Trre16g02360 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Trre16g02360 754 Pfam S-locus glycoprotein domain 146 255 IPR000858 GO:0048544
Trre16g02360 754 SMART ntp_6 279 358 IPR003609 -
Trre16g02360 754 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 520 723 - -
Trre16g02360 754 CDD STKc_IRAK 450 717 - -
Trre16g02360 754 Pfam PAN-like domain 276 344 IPR003609 -
Trre16g02360 754 Gene3D Hepatocyte Growth Factor 276 354 - -
Trre16g02360 754 ProSiteProfiles PAN/Apple domain profile. 276 359 IPR003609 -
Trre16g02360 754 SMART serkin_6 444 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g02360 754 Pfam D-mannose binding lectin 10 113 IPR001480 -
Trre16g02360 754 ProSiteProfiles Bulb-type lectin domain profile. 1 85 IPR001480 -
Trre16g02360 754 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 411 519 - -
Trre16g02360 754 Gene3D Phosphorylase Kinase; domain 1 418 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02360 Trre-Chr16 19513360 19516633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02360 432 754 Receptor kinase-like Gene Family AT4G11530 57.864 4.72e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre16g02360 PK_Tyr_Ser-Thr 3.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02360 - - aprc:113865090 1101.66