Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02357 ATGTGGTATAGGAATTTATTACCTTTGACGGTTGTTTGGGTTGCCAACAGAGAAATACCTGTGAAGAATAATTCTGGAATATTGAAACTCGATGAAAATGGAGTTCTTGTGGTTCTTAATGGTGCAAACGGAACAATTTGGTTGTCTAATATGTCGAACAAGGTGGTGAATGATTCGATAACTGTACAGTTATTGGACACGGGAAATTTTGTGTTGAGAATTGGGAAGGATAATGTTTTGTGGCAGAGTTTTGATTATCCGTGTGATACGTTATTGCCAGGAATGAAGCTTGGATGGAACTTAGTAACCGGTCTTAACCGGTTTGTGACATCTTGGAAAAGTGCAGATGATCCGGCAATGGGAGAGTATTCTGTGAAAATTGACAAAAGAGGATTGCCTCAGCTAGTTATTATGAAGAGATCTGTAAATAAATTTAGAATTGGGTCATGGAATGGACTTGGTTTTACGGGATACCCAGTTCAACAATTGAAGCAGAAACAAAGATTTCAATTTGTCTTCAATGAAAAAGAAATTTATCATCAATATGAAGGAGTTGATCCCTCTGTTGTCTCCATTTATTCAGTTTCCACTTCAGGTAATTTGCAGGTTTTAGCGTGGACAAGTAAAAAAAGCAGTAGAATAGTTATCTACACTGGCGGAGAGGATTCATGTGATAATTACGCTATGTGTGGTGCTAATTCTATATGCAATATGAATGGCAACATTCCCAAATGTGAATGCTTGAAAGGTTTTGTTCCTAAATTTCCTGAACAATGGAGTATGTCATATTGGTCTAGCGGTTGTGTTCAAAGGTTTAATTTTGTTTGTGGAGACGATAATTTAGGCGGCTTCTTAACGTACAAAGAAATGAAATTACCAGACACGTCTTTGTCATGGTTTAACAAAACCATGAACCTTATGGATTGTCAGAAGTCATGTCTTAAAAATTGTTCGTGCACGGCTTATTCAAATTTGGATATTCGACATGGAGGAAGTGGCTGTGTGCTTTGGTTTGGTGATCTGGTTGATATGAGGACATTCTCACAATGGGGACAAGAGTTTTATATCAGAGTCCCTTCTTCAGTACTAAATGAATTTGAACCTGCTGCGGTTAATGGCCACCAAAACAAGAAGAAGATCGGAATCATAGTGGGCGTGGTTTCTTTTGGATTAGTTATATGTGTCTGCTTAATAATACTGAGAAAGCGAGTGGCAGCGAGAGTATATAATTTTGTACCATTTCAATGGCAGCAAGAATATTTTAAAGTGATAAAGGAAGACATGGATCTTCCAATAGTTGATTTGTCAATTATTGTTAAAGCCACTGATAATTTTTCTAGTGAAAACAAACTTGGGGAAGGTGGATTTGGACCGGTATACAAGGGTACCCTCACAGATGGAAAAGAGGTTGCCATCAAACGTAACTCAAAGATGTCTGATCAAGGATCGGATGAGTTTAAAAATGAAGTTTTTATGATTGAAAAACTTCAGCATCGTAATCTTGTGAAGCTTCTAGGTTGTTGTATTGAAGGAGAGGAAAAAATGTTGATCTATGAATACATGCCCAACAGGAGCTTGGACTACTTCATCTTTGATGAAACAAGAAGCAAGCTCTTGGGATGGTCTCAACGTTCGTATATTATTGCTGGCATTGCTAGAGGTCTTCTCTACCTTCATCATGACTCCAGACTGAGAATTATTCACAGAGATTTGAAAACTAGCAATATCCTACTAGATGCACATATGAATCCAAAAATCTCAGATTTTGGTCTAGCTCGAATATTTGGGGTTGATCAAATTGAAGCCAAAACTAAGAGAATGGTTGGAACATATGGTTACATGCCTCCAGAGTATGCTGTGCATGGTCATTACTCCATAAAATCAGATGTCTTTAGTTTTGGTGTATTAGTACTAGAGATAATTAGCGGGAAAAAGAATAAGGGATTTTCAGATCCGGAACACGCCCTTAACCTTCTTGGACACGCATGGAGACTTTGGACTGAAAACAGACCATTGGAATTGCTAGATAGACACTTACTTGAAACATGTAATTCGTCTGAAGTCTTTAGATGCATACATGTAGGTTTGTTGTGTGTACAACAAAAACCAGCAGATAGGCCAGACATGTCTTCTGTCATTCTTATGCTGAATGGTGAGAAACTGTTGCCTCAGCCGAAGATGCCTGGATTTTACACCGGAACGGGTTTACCTGAAGCAATTTCTTCAAATCAGATGTCAGTAACTACATTTGCAGCAAGATAG 2262 0.3811 MWYRNLLPLTVVWVANREIPVKNNSGILKLDENGVLVVLNGANGTIWLSNMSNKVVNDSITVQLLDTGNFVLRIGKDNVLWQSFDYPCDTLLPGMKLGWNLVTGLNRFVTSWKSADDPAMGEYSVKIDKRGLPQLVIMKRSVNKFRIGSWNGLGFTGYPVQQLKQKQRFQFVFNEKEIYHQYEGVDPSVVSIYSVSTSGNLQVLAWTSKKSSRIVIYTGGEDSCDNYAMCGANSICNMNGNIPKCECLKGFVPKFPEQWSMSYWSSGCVQRFNFVCGDDNLGGFLTYKEMKLPDTSLSWFNKTMNLMDCQKSCLKNCSCTAYSNLDIRHGGSGCVLWFGDLVDMRTFSQWGQEFYIRVPSSVLNEFEPAAVNGHQNKKKIGIIVGVVSFGLVICVCLIILRKRVAARVYNFVPFQWQQEYFKVIKEDMDLPIVDLSIIVKATDNFSSENKLGEGGFGPVYKGTLTDGKEVAIKRNSKMSDQGSDEFKNEVFMIEKLQHRNLVKLLGCCIEGEEKMLIYEYMPNRSLDYFIFDETRSKLLGWSQRSYIIAGIARGLLYLHHDSRLRIIHRDLKTSNILLDAHMNPKISDFGLARIFGVDQIEAKTKRMVGTYGYMPPEYAVHGHYSIKSDVFSFGVLVLEIISGKKNKGFSDPEHALNLLGHAWRLWTENRPLELLDRHLLETCNSSEVFRCIHVGLLCVQQKPADRPDMSSVILMLNGEKLLPQPKMPGFYTGTGLPEAISSNQMSVTTFAAR 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02357 753 SMART ntp_6 279 358 IPR003609 -
Trre16g02357 753 Pfam Protein tyrosine and serine/threonine kinase 448 713 IPR001245 GO:0004672|GO:0006468
Trre16g02357 753 Pfam PAN-like domain 282 344 IPR003609 -
Trre16g02357 753 ProSiteProfiles EGF-like domain profile. 220 257 IPR000742 -
Trre16g02357 753 CDD PAN_AP_plant 277 359 - -
Trre16g02357 753 SMART serkin_6 445 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g02357 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 566 578 IPR008271 GO:0004672|GO:0006468
Trre16g02357 753 ProSiteProfiles PAN/Apple domain profile. 276 359 IPR003609 -
Trre16g02357 753 Gene3D Hepatocyte Growth Factor 277 354 - -
Trre16g02357 753 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 521 724 - -
Trre16g02357 753 CDD STKc_IRAK 451 718 - -
Trre16g02357 753 CDD B_lectin 1 87 IPR001480 -
Trre16g02357 753 Gene3D - 2 84 IPR036426 -
Trre16g02357 753 ProSiteProfiles Bulb-type lectin domain profile. 1 85 IPR001480 -
Trre16g02357 753 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 1 706 - -
Trre16g02357 753 SUPERFAMILY alpha-D-mannose-specific plant lectins 8 118 IPR036426 -
Trre16g02357 753 Gene3D Transferase(Phosphotransferase) domain 1 521 722 - -
Trre16g02357 753 Pfam D-mannose binding lectin 10 113 IPR001480 -
Trre16g02357 753 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 275 358 - -
Trre16g02357 753 PIRSF SRK 1 752 IPR024171 GO:0004674
Trre16g02357 753 SMART blect_4 1 87 IPR001480 -
Trre16g02357 753 Pfam S-locus glycoprotein domain 145 255 IPR000858 GO:0048544
Trre16g02357 753 Gene3D Phosphorylase Kinase; domain 1 413 520 - -
Trre16g02357 753 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 412 520 - -
Trre16g02357 753 SUPERFAMILY Protein kinase-like (PK-like) 428 716 IPR011009 -
Trre16g02357 753 ProSiteProfiles Protein kinase domain profile. 445 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02357 Trre-Chr16 19487645 19490686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02357 382 730 Receptor kinase-like Gene Family AT4G23230 54.286 1.12e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre16g02357 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02357 - - aprc:113865090 1090.1