Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02347 ATGAATATTCAAAATCTTTCCTTATTGATCATTCTTTCATGTTTAGTTATACCTTCTCCAAAATATTCCATAGCAACAGATACTATTCAACTCTCCCAGTCCTTCACTGTTGGCATGACCTTGGTTTCCCAACATGAAAAGTTTGTACTTGGTTTCTTCACTCCTGAAAATTCCAACAAAAGTTACTTAGGAATTTGGTACAAGAATATCCCAATTCAAACAATTGTTTGGGTTGCAAATGGTGCCAAACCCATCAATGATTCCTCATCTGGTATCCTAACACTAAACAACACTGGCAACCTTGTCCTCAAACAACATGACAAAGTAGTTTGGTATACAACATCTCAACAAGATTCCCGGAATCCAGTTGCACAACTTCTAGATTCAGGGAATTTTGTGATAAGAGACGGGAAAGAAACAAATCCAAAAGCCTATTTGTGGCAGAGTTTTGATCACCCTTGTGATACAATACTTCCAGGGATGAAGTTGGGATGGAATCTTCGAACTCATACGGAAACAAGAATGACATCTTGGAAAAGTCCGGACGATCCATCACCTGGAGACTTTTATTGGGGTTCATTGCTTTATAATTATCCTGAACAATATTTGATGCAAGGATCAAATAAATTTATAAGAATTGGACCGTGGAATGGATTGCATTTTAGTGGTATACCAGATCAAAAGCCAAACAACATTTTTGCTTACTACCATGTGTCTAACAAGGATGAGATTTATACAATTTATACTTTGAAGAACGATTCTGTCATTACAAGAATGGTAATGAATCAAACCACATTGAACTTTTCTCGATACGTGTGGATGGAAGATCAACAAATTTGGAAAGTTCTTAAATCACTACCTAAAGACTTGTGTGACTTTTATGGAACCTGTGGAGCTTATGGTACTTGCATAATCACAGGTTCACAAATATGTGAATGCTTATCAGGTTTTAGCCCCAAGTCTCCAGTTGCTTGGAACGCAACTGATTGGAATCAAGGATGTGTACGAAATAAACCGTTAAACTGTACTAACAAACTCAAGGATGGATTTGTGAAAGTGAAAGGTCTAAAAGTGCCAGATTGTACACATACTTGGGTAGATCAAACCATAAGTCTTCATGAATGTAGAGTCAAGTGCTTGAATGATTGTTCTTGTATGGCTTATACTAATACAAACATATCAGGAGAAGGCAGTGGCTGTGTCATATGGTTTGGTGATTTAATTGATATTAGGACGTTTGAAGATGATGGACAAGATCTTTATATTAGAATGGATGCTTCTGAATTTGGCAAAAAGGGACATGACGGGCTCAGGAATGATCTGATAAGAATACTTACTAGCACCATTATAGTTTCCGGGATACTTTTTCTTGGATATTGGTGCTACATATTGCGGAGGCGCAGAATAATTGAGAATTCGGAAGTTATCGATATGGAAGGTGACAAAGGTAGTGAGGACGAGGATGATCTCGATCTCCCATTGCTTGCATATTCAACCTTAGTCACTGCCACTAATAACTTCTCGATAAAGAACAAGATTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGGAGATTGGTATGTGGACAAGAAATTGCCGTGAAGAGGCTTTCAAGTGACTCTGGACAAGGAATTACCGAGTTAAAGAATGAAGTAAAGCTTATAGCAAAACTTCAACACCGGAATCTTGTTAAACTTCTTGGATGTTGCATCGACGAAGAAGAAAGAACACTAGTTTATGAATACATGAAAAACCGTAGCTTGAATCGGTTTATTTTTGATGATACTAAAAGCAAACTTCTAAATTGGCCTAAGCGCTTCAACATTATTAGCGGAATTGCTCGAGATTTTGGTATAGCTAGAATTTTCGGATTAGATCAAACACATGGAAATACCAAGCGAGTGGTTGGAACATATGGCTACATGGCACCAGAATATGCTGTTGATGGACTTTTTTCTGTGAAATCTGACGTGTTCAGCTTTGGAATTTTGATGCTGGAGATTATATGTGGGAAGAGAAATAGAGGTTTTTATGTTGAAAATGACTCTCCTAACCTTGTCACCCATGCATGGAGTTTATGGAAAGAGGGCAGGGCTTTAGAACTAATTGACAAAAAGATAGAGGATTCTTGTGTTGAATCAGAGGTATTACGTTGCATTCATATCAGTCTATTGTGTGTCCAGCAATTGCCAGAGGATAGGCCTGTTATGCCTTCAGTTGTTCTAATGTTGGGGAGTGACGGTGAATTTTCTAAGCCAAAACAGCCCGGTTACTATGTAAAGAAGGATTCATTTGCAGAATCTTCCAATTCAGGTCGAAGTGAAAAGCTCATGACCAACGATATGACCATCACCTTATTAGAATCCCGATGA 2373 0.381 MNIQNLSLLIILSCLVIPSPKYSIATDTIQLSQSFTVGMTLVSQHEKFVLGFFTPENSNKSYLGIWYKNIPIQTIVWVANGAKPINDSSSGILTLNNTGNLVLKQHDKVVWYTTSQQDSRNPVAQLLDSGNFVIRDGKETNPKAYLWQSFDHPCDTILPGMKLGWNLRTHTETRMTSWKSPDDPSPGDFYWGSLLYNYPEQYLMQGSNKFIRIGPWNGLHFSGIPDQKPNNIFAYYHVSNKDEIYTIYTLKNDSVITRMVMNQTTLNFSRYVWMEDQQIWKVLKSLPKDLCDFYGTCGAYGTCIITGSQICECLSGFSPKSPVAWNATDWNQGCVRNKPLNCTNKLKDGFVKVKGLKVPDCTHTWVDQTISLHECRVKCLNDCSCMAYTNTNISGEGSGCVIWFGDLIDIRTFEDDGQDLYIRMDASEFGKKGHDGLRNDLIRILTSTIIVSGILFLGYWCYILRRRRIIENSEVIDMEGDKGSEDEDDLDLPLLAYSTLVTATNNFSIKNKIGEGGFGPVYKGRLVCGQEIAVKRLSSDSGQGITELKNEVKLIAKLQHRNLVKLLGCCIDEEERTLVYEYMKNRSLNRFIFDDTKSKLLNWPKRFNIISGIARDFGIARIFGLDQTHGNTKRVVGTYGYMAPEYAVDGLFSVKSDVFSFGILMLEIICGKRNRGFYVENDSPNLVTHAWSLWKEGRALELIDKKIEDSCVESEVLRCIHISLLCVQQLPEDRPVMPSVVLMLGSDGEFSKPKQPGYYVKKDSFAESSNSGRSEKLMTNDMTITLLESR 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02347 790 Gene3D Transferase(Phosphotransferase) domain 1 618 755 - -
Trre16g02347 790 Pfam PAN-like domain 342 410 IPR003609 -
Trre16g02347 790 Pfam Protein tyrosine and serine/threonine kinase 508 614 IPR001245 GO:0004672|GO:0006468
Trre16g02347 790 Pfam Protein tyrosine and serine/threonine kinase 616 741 IPR001245 GO:0004672|GO:0006468
Trre16g02347 790 ProSiteProfiles Protein kinase domain profile. 507 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g02347 790 SMART blect_4 32 153 IPR001480 -
Trre16g02347 790 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Trre16g02347 790 Pfam D-mannose binding lectin 74 179 IPR001480 -
Trre16g02347 790 Gene3D - 22 150 IPR036426 -
Trre16g02347 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 150 - -
Trre16g02347 790 CDD PAN_AP_plant 339 423 - -
Trre16g02347 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 582 - -
Trre16g02347 790 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 735 - -
Trre16g02347 790 CDD B_lectin 32 153 IPR001480 -
Trre16g02347 790 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Trre16g02347 790 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Trre16g02347 790 Gene3D Transferase(Phosphotransferase) domain 1 493 617 - -
Trre16g02347 790 SUPERFAMILY Protein kinase-like (PK-like) 491 742 IPR011009 -
Trre16g02347 790 PIRSF SRK 1 615 IPR024171 GO:0004674
Trre16g02347 790 PIRSF SRK 616 790 IPR024171 GO:0004674
Trre16g02347 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 623 749 - -
Trre16g02347 790 SMART ntp_6 345 424 IPR003609 -
Trre16g02347 790 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Trre16g02347 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 184 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02347 Trre-Chr16 19441576 19444885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02347 439 761 Receptor kinase-like Gene Family AT4G23230 48.045 1.29e-103 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre16g02347 PK_Tyr_Ser-Thr 1.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02347 - - gmx:100775648 1118.99