Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02346 ATGGAACCTCATCAATTGCCTGCAACAACATTTTGGCACTCTCTTGTTATCATTTTACTTTTTACGCCCCTCATCATAAAACTTTTGATCAAACAAAACAACACCCATAAATCTAGAACTAGAAAACTTTCATTACCTCCAGGTCCTACACCTTGGCCTATAGTAGGTAACCTCCCTGAAATGTTAGCAAATAGGCCTACATTTAAATGGGTACAAAAGATTATGACTGACCTTAACACAGAAGTTATGTGTATCCGTTTAGGTAACATTCATGTAATTTTTGTTAGCAGCCCAGAAATTGCACGTGAATTTTTTATAAAACAGGATTCAGTTTTTGCTTCAAGACCTATTTATTGGACTAATGAGTATGTTACTGGTGGATATTTAAGCGCGACGCTTAGTCCGTATGGAGAACAATGGAAGAAAATAAAGAAATTAATTAGCAATGAATTGGTTTCACCACTAAGGCATAAATGGCTTCAAGATAAGAGAGTGGAAGAAGCTGATAATCTTGTTCGTTGTATTTACAATAAATGTGTTAAAAGTGGTGGAAAAGGTTTGGTTAATGTAAGAATTGCTGCACAACATTATGCTGGGAATGTGATTAGGAGATTGATTTTGAATTTGAGGCATTTTGGAAATGGAAGTGAAGAAATTGGTGAACCTGGTTTAGAGGAAGTGGAATATGTGGAAGCACTTTTTATTGTGTTACAACATTTATTTGCTTATTCTGTTACTGATTACATGCCATGTTTGAGGGGTCTTGATTTGGATGGTCATGAAAGGATTTTGAAAAATGCATGTCAAACTGCAAGGAAATATCATGACCCTATAATTGAAGATAGAATTCAAATGTGGAAGTATGGAAAAAAGAAAAATAAAGAAGATTTGCTTGATGTTCTCATCTCACTCAAAGATGCACACAACAATGCTCTCTTGTCTAAGCAAGAAATTAAGTCTATTGTTATGGATTTGACACTTGCAGCTATTGATAACCCATCAAATGCATTTGAATGGGGACTTGCTGAAATGATAAATCAGCCTGAAATACTTAAAAAAGCCACTGAAGAATTAGACAATGTGGTTGGAAAAGGAAGGTTGGTGCAAGAACATGATTTCCCGAAACTCAACTATGTGAAAGCTTGTGCAAGAGAAGCTTTTCGCTGTCACCCGATTAGCGATTTCAATATTCCCCACGTCTCGATGGAAGACACAATTGTTGCTAATTACTTTATCCCAAAAGGTAGCCATGTGGTATTAAGGAGACAAGGACTTGGCCTAAACTCCAGAGTTTGGAAAGAACCACTCAAATTCAAACCAGAACGTCATCTTAAGACTAATGGATCTAATTTGGATTTGGCATTTTCAACTTTGGATTCAGTAACATTTAGCACCGGAAGACGCGGGTGTCCGGGTTTAATGCTTGGAACTTCAATGACTATTATGTTATTTGCAAGGATGCTTCATGGGTTCACTTGGAGTGTGACCCCCGATCAGTCTATTATCGATCTCTCCGAATCTTATGGTGGTACCACCAAAGCTAAGCCACTTGTGGCATTGGCAGAGCCAAGGTTACCACCGGAGGCTTATCATTTATTTTAA 1602 0.3733 MEPHQLPATTFWHSLVIILLFTPLIIKLLIKQNNTHKSRTRKLSLPPGPTPWPIVGNLPEMLANRPTFKWVQKIMTDLNTEVMCIRLGNIHVIFVSSPEIAREFFIKQDSVFASRPIYWTNEYVTGGYLSATLSPYGEQWKKIKKLISNELVSPLRHKWLQDKRVEEADNLVRCIYNKCVKSGGKGLVNVRIAAQHYAGNVIRRLILNLRHFGNGSEEIGEPGLEEVEYVEALFIVLQHLFAYSVTDYMPCLRGLDLDGHERILKNACQTARKYHDPIIEDRIQMWKYGKKKNKEDLLDVLISLKDAHNNALLSKQEIKSIVMDLTLAAIDNPSNAFEWGLAEMINQPEILKKATEELDNVVGKGRLVQEHDFPKLNYVKACAREAFRCHPISDFNIPHVSMEDTIVANYFIPKGSHVVLRRQGLGLNSRVWKEPLKFKPERHLKTNGSNLDLAFSTLDSVTFSTGRRGCPGLMLGTSMTIMLFARMLHGFTWSVTPDQSIIDLSESYGGTTKAKPLVALAEPRLPPEAYHLF 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02346 533 SUPERFAMILY Cytochrome P450 46 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02346 533 Pfam Cytochrome P450 46 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02346 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Trre16g02346 533 Gene3D Cytochrome P450 30 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02346 533 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02346 533 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02346 533 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02346 533 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02346 533 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02346 533 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02346 533 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02346 533 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 16 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02346 Trre-Chr16 19436551 19439268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02346 14 530 Cytochrome P450 AT5G05260 51.538 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02346 - K12153 adu:107486438 635.95