Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02335 ATGGAGACAGAAAGCCAGCTCCAAGTTTCATCAAATTCAGGGCAGCTCAAAGAAGGAACCTCTTTTTTCAAAGCTTGTTTCAATGGTGTCAACACCTTGGCAGGAATTGGGATGCTTTCAATGCCATATGCAATTTCTCAAGGAGGGTGGTTGAGTTTTATGATGCTATTTATTTTTGCTATGATATGTTGGTACACTGCTTTACTTCTAGAAAGGTGTATGAATCAACAACCACTAATCAAATCCTATGTTGATATAGGTGAGGTTGCTTTTGGTTACAAAGGAAGAGCTTTGATAGCAAGTTTTATATATTTAGAGTTGTTTTTAATTTCTATTGAGCTTCTTATATTAGTAGGTGACAATTTGGAGAAATTGTTTCCAAATATGAGTCTCACAATAATTGGATTTAAAATTGGAAGTAAAACATGTTTTGTGTTAATTACTGCTTTGGTAGTATTACCAACAACTTGGTTGAGAAGTTTAGGAGCTTTGGCCTATATATCTGTTGGTGGTATATTTGCATCAATTATTTTAATTGGTTGTGTTTTGTGGGTGGGAGAAGTTGATGGTGTTGGATTTCATGAAAGAGGGAAATTAGTAAATTTGGGAGGATTATCTACTGCTATGAGCCTTTTTGCTTTCTGTTACTGTGCTCATGCATTATTGCCAACAATATGCAATTCTATGAAGGATAGAAAGCAATTTTCCAAGGTTTTGCTGGTTTGTTTTGTGGCAAGCACAACTATCTATGGAACTGTAGCTGTTTTAGGCTACACAATGTTTGGAAATCATTTGAAGTCTCAGATCACATTAAATCTACCAACAAATACAATAAGTACAAAAATAGCAATATATACCACAATAATAAATCCTTTCACCAAGTATCCTATTGTAATCACTCCAATAACCAATGCTATTGAGGAAAAATGGCATCTATGCAAGAGCAGACCAATTAGCATTCTCATTAGAACAACAATTGTGTTCAGCAGTGTACTTGTGGCACTATTTGTTCCATTTTTTGGATACATTATGGCGTTTATTGGTGCTTTCTTGAGTGTGGCAATCTCATTGTTGTTTCCTTGCCTTTGCTACTTAAAGATTCACAAAGCTGCAAGACGATTTGGGTTAGAGTTGATCATTATCATAGGAATTCTGATCATTGCTACACTTATTGGAAATACATGGTACCTACATTTCACTTGTGAAAATAGCAAATAG 1218 0.3489 METESQLQVSSNSGQLKEGTSFFKACFNGVNTLAGIGMLSMPYAISQGGWLSFMMLFIFAMICWYTALLLERCMNQQPLIKSYVDIGEVAFGYKGRALIASFIYLELFLISIELLILVGDNLEKLFPNMSLTIIGFKIGSKTCFVLITALVVLPTTWLRSLGALAYISVGGIFASIILIGCVLWVGEVDGVGFHERGKLVNLGGLSTAMSLFAFCYCAHALLPTICNSMKDRKQFSKVLLVCFVASTTIYGTVAVLGYTMFGNHLKSQITLNLPTNTISTKIAIYTTIINPFTKYPIVITPITNAIEEKWHLCKSRPISILIRTTIVFSSVLVALFVPFFGYIMAFIGAFLSVAISLLFPCLCYLKIHKAARRFGLELIIIIGILIIATLIGNTWYLHFTCENSK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02335 405 Pfam Transmembrane amino acid transporter protein 19 371 IPR013057 -
Trre16g02335 405 PANTHER AMINO ACID TRANSPORTER 14 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02335 Trre-Chr16 19288875 19291171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02335 1 392 Amino Acid or Auxin Permease AAAP Family AT3G28960 45.823 2.05e-129 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02335 K15015 - gmx:100812006 568.54