Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02325 ATGGAAATCAACATTACATCAATAGAAACAATTAAATCATCATCTCCCACAATCGAAGAACACAAAACCTACAAACTATGTTTATTTGATGTGTTTCAACTAAACACATATTTTCCATTAATCCTATTTTATCACAAAACCAATGAAATGCAAGAATCCTCAAATGTCTCAACTCAACTAAAAAATTCACTATCCAAGGCACTAACAATTTTCTACCCTCTATGTGGTAGAAGAAGTGATATCTTCTCAATCGATTGCAACGACGAAGGCGCGATTTACATGGAAGCTTCAATAAACATGGAAATGAAAGAGTTCTTAAGTCCACCAAAATTGGAATTAATAAACAAATTGCTTCCTTGTGAACCAAACAAGACACAACCTTACAATGAAATCTTACCACAAATTTTAGTCCAAGTGAACAATTTCAAATGTGGTGGAATAGCTATTGGTTTGTGCAATCTCCATACAATATTAGATGCATATTCTTGTAGTCTATTCTTGAAAACATGGTCTTCTATTTGTAAAGGGTCAAATGATGAAATTTGTGAGCCAAATTTCTCAATTGCTTCTTTAACTTTCCCTCCAAGAAACACCTTTGGTGTTAGGGCTGGTGTGATGAATATTAACAAAGGATTAGAGATAGAAGTCAAATGCTCTACAAGAAGATTCTTGTTTGATAACAAATCAATTAACGACTTGAAAATTGCGTCGACGAAAAACGATGGAATCAACACAAAATTACCAACAAGTTACAAAGTAGTTACTTCATTTATATGTAAGCACATGAGTGTAGCATGCATGAAAGAATTTTATGATGAAATCAAGAGGCCATTGGTAGTTTTACATGTTGTTGACATGAGGAGAAGGATGGGAGAAACTTTGTTACAAAATTCTATTGGAAATTTAATATGGCCAGCATTGATGGTTTGTGAAAATGTCAACAAGGACACTAATATTAGTGACATGGTTAAAATTTTGGAAGATGAAATTGGAAAGGTTAATGAAGAATTGTTTTTAAAATTGAAAAATGATCCTAGGTTTTTATGGAGTGATGAGTGTGCTGAATTAATGCTTGAAGGTATGGAAAATGAAAATCCAATATCTTTTGTGTTTACAAGTTGGGGAAATATGGGATTCAAAGAGATTGATTTTGGTTGGGGAAAGCCTTTATGGATAGCTCAAAGAGGTGGTACCAAAGAAACTATTCCAAATACAGTTGTGTTGATGGAAACATATGAGGGAATTGAGGCATGGGTGACAATGGCTGATAAGCATTTAGATGACTTGGAAAATGATACTGAATTCCTCAAATTTGCCTTGCTTAATCCTAATATTAATTTCAATTGTGTAGTAATTTAA 1359 0.3304 MEINITSIETIKSSSPTIEEHKTYKLCLFDVFQLNTYFPLILFYHKTNEMQESSNVSTQLKNSLSKALTIFYPLCGRRSDIFSIDCNDEGAIYMEASINMEMKEFLSPPKLELINKLLPCEPNKTQPYNEILPQILVQVNNFKCGGIAIGLCNLHTILDAYSCSLFLKTWSSICKGSNDEICEPNFSIASLTFPPRNTFGVRAGVMNINKGLEIEVKCSTRRFLFDNKSINDLKIASTKNDGINTKLPTSYKVVTSFICKHMSVACMKEFYDEIKRPLVVLHVVDMRRRMGETLLQNSIGNLIWPALMVCENVNKDTNISDMVKILEDEIGKVNEELFLKLKNDPRFLWSDECAELMLEGMENENPISFVFTSWGNMGFKEIDFGWGKPLWIAQRGGTKETIPNTVVLMETYEGIEAWVTMADKHLDDLENDTEFLKFALLNPNINFNCVVI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02325 452 Gene3D - 216 438 IPR023213 -
Trre16g02325 452 PANTHER F21J9.9 4 439 - -
Trre16g02325 452 Pfam Transferase family 1 435 - -
Trre16g02325 452 Gene3D - 1 203 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02325 Trre-Chr16 19160103 19161461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02325 39 396 Monolignol Biosynthesis Gene Families AT5G48930 24.156 4.24e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02325 - - gmx:102667966 631.328