Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02306 ATGGCGGGGAAGTCTGGCTCAGTATCGATCCATGTCCCTTACAAGAATCTAAGAAACGATTCGTCCGCTGCTGAGGTTGAACTCGTCGGTGTCGATGAACCGCGTCAACGGATCGATCTTAATTCCCCGCGTTCCGATCAATTACCGACGAAGAAGAACGTCTCGTTAACTCACCTCGTTCTCAGTTGCACCGTCGCCGCCGGTGTTCAGTTTGGTTGGGCTTTGCAACTTTCTCTTCTCACACCTTACATTCAGACATTGGGAATAGGTCATGCTTTTTCTTCATTTATTTGGCTTTGTGGCCCCATTACAGGACTTGTGGTTCAACCTTGTGTTGGTATTTGGAGTGATAAATGTACTTCAAAGTTTGGCAGAAGACGTCCGTTTATTCTGGCAGGATCTCTTATGATCTCGGTTGCGGTGATATTGATCGGCTTTTCTGCAGACATTGGATATATATTAGGGGATACAAATGAGCATTGCAGAACATTTAAAGGGACCCGAACAAGGGCTGCTGTTATATTTATTCTTGGGTTCTGGATGCTGGACCTTGCCAACAACACAGTGCAGGGGCCAGCTAGAGCACTTTTGGCAGATCTGGCAGGTCCTGATCAACGCAATGTATCAAATGCTGTCTTTTGCTCATGGATGGCAGTGGGAAACATCCTAGGATATTCTTCTGGCGCTAGTGGAATGTGGAACAAATGGTTCCCTTTCTTGACAAGTAGAGCTTGCTGTGAGGCGTGTGGCAATCTTAAGGCGGCATTTCTTGTTGCTGTGGTGTTTTTGACTTTATGCACACTTGTAACCCTATATTTTGCTGATGAAGTTCCGCTGACTACTGCAAGTCAACATCACCGGTTATCAGATTCGGCTCCTTTATTGGATGAACAACCAAATGGCATTGAATTTTCAAAACAGAAGCCGTTATCTGGTATGAACGAGACCAATGGTAAGATAAGTGAGGATCACTCTGAAGAAGCTGTAAAGCTGAAGCATGGGGAAGATCAGAATGAAAATTTAATGGATGGGCCTGGAGCAGTATTGGTTAACTTGTTGACAAGTTTAAGGCATTTGCCACCTGCTATGCATTCTGTGTTGGTTGTAATGGCTCTCACTTGGTTGTCATGGTTTCCCTTCTTTCTGTTTGATACGGATTGGATGGGGAGAGAAGTTTATCACGGGGATCCAAAAGGGACCACTGCTGAAGTAGATCTTTATGATCAAGGTGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTGCTTGGAATTAGCTCTTTTTTAATCGAACCTATGTGTAAGTTGATGGGTGCAAGATTAGTATGGGCAGTGAGCAATTTTGTCGTCTTTGTTTGCATGGCGGGCACTGCTATCATTAGTCTAATATCTGTCCATGATTATTCTGGAGGGATAGAACATGCAATGGGAGCAAGTGAAGGAATCAAGGTTGCTTCCTTGGTTGTGTTTGTTCTGCTTGGATTTCCACTTGCGATTACCTACAGTGTTCCCTTTGCTGTTACAGCAGAGTTGACTGCTGATTCCGGTGGTGGCCAAGGATTGGCTATAGGAGTTCTAAATCTTGCAATTGTTGCTCCACAGATGATTATATCCCTTGGTTCTGGTCCATGGGATGCTCTCTTTGGTGGTGGCAATATTCCTGCCTTTGTGTTGGCGTCCGTCTGTGCTCTCGCCGGTGGCATTGTTGCAACTCTAAAACTGCCAAATCTTTCTAGCAATGCCTTCAAGTCATCCGGATTTCATTTTGGCTAG 1779 0.4474 MAGKSGSVSIHVPYKNLRNDSSAAEVELVGVDEPRQRIDLNSPRSDQLPTKKNVSLTHLVLSCTVAAGVQFGWALQLSLLTPYIQTLGIGHAFSSFIWLCGPITGLVVQPCVGIWSDKCTSKFGRRRPFILAGSLMISVAVILIGFSADIGYILGDTNEHCRTFKGTRTRAAVIFILGFWMLDLANNTVQGPARALLADLAGPDQRNVSNAVFCSWMAVGNILGYSSGASGMWNKWFPFLTSRACCEACGNLKAAFLVAVVFLTLCTLVTLYFADEVPLTTASQHHRLSDSAPLLDEQPNGIEFSKQKPLSGMNETNGKISEDHSEEAVKLKHGEDQNENLMDGPGAVLVNLLTSLRHLPPAMHSVLVVMALTWLSWFPFFLFDTDWMGREVYHGDPKGTTAEVDLYDQGVREGAFGLLLNSVVLGISSFLIEPMCKLMGARLVWAVSNFVVFVCMAGTAIISLISVHDYSGGIEHAMGASEGIKVASLVVFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVAPQMIISLGSGPWDALFGGGNIPAFVLASVCALAGGIVATLKLPNLSSNAFKSSGFHFG 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02306 592 Gene3D MFS general substrate transporter like domains 56 575 IPR036259 -
Trre16g02306 592 Pfam MFS/sugar transport protein 74 221 - -
Trre16g02306 592 FunFam Sucrose transporter SUC2 57 281 - -
Trre16g02306 592 CDD MFS_SLC45_SUC 59 572 - -
Trre16g02306 592 PANTHER SUGAR TRANSPORTER 55 574 - -
Trre16g02306 592 SUPERFAMILY MFS general substrate transporter 59 578 IPR036259 -
Trre16g02306 592 FunFam Sucrose transport protein SUT5 364 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02306 Trre-Chr16 18893638 18899894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02306 142 592 Sucrose Transporter Gene Family AT2G02860 70.796 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02306 K15378 - gmx:100803894 995.727