Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02251 ATGGAAAAGAGTGAGGTGAAGCTTATTGGCAAATGGTCAAGTCCTTATGTGGCAAGGGTGAAGATTGCCCTTAACATCAAATCACTTGAATATGAAAATTTTGAAGAGAATGAAACTTTTAACCCCAAAAGTGATCTTCTTGTTCAATCCAACCCTGTTTATGGCAAAGTCCCAGTTCTCATTCACCAAGATAAACCCATTTGTGAGTCTCTTATTATTGTTGAATACATAGATGAAACTTGGTCAAGTTTTCCTTCTATACTTCCCTCTGATTCTTATGATAGATCAGTTGCTAGATTCTGGGCTGCTTATATAGATCAAAAGTGGTTTCCTCCAATGCAAAGCATAATTACTGTTGAAGGAGAGGAGGAAAGGAAGCCATATTTTGAGGTAATGGAAGAAGTGGTTGAGAAGATGGAGGAAGCTTTTGAAAAATGCAGCAAAGGAAAGCCATTTTTTGGTGGGGATATGATTGGTTATCTTGATATTGCATTTGGAAGCTTTTTGGGATGGCTTAGTGTGATAGAGCATGATTATGAAAGGAAAGTGTTGGTTGAAGAAAAGGCTCCTAATTTAGTGAAATGGGCTGAGAGATTTATTGCTGATCCTGCTGTCAAGGGGATTATACCTGAGACTGAGAGACTTGTTAAACTTTCCAAAGCTTTTCAGATCAAATGGAGAGCTGCTATTGGTAAGATATAG 702 0.3789 MEKSEVKLIGKWSSPYVARVKIALNIKSLEYENFEENETFNPKSDLLVQSNPVYGKVPVLIHQDKPICESLIIVEYIDETWSSFPSILPSDSYDRSVARFWAAYIDQKWFPPMQSIITVEGEEERKPYFEVMEEVVEKMEEAFEKCSKGKPFFGGDMIGYLDIAFGSFLGWLSVIEHDYERKVLVEEKAPNLVKWAERFIADPAVKGIIPETERLVKLSKAFQIKWRAAIGKI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02251 233 Pfam Glutathione S-transferase, N-terminal domain 5 79 IPR004045 -
Trre16g02251 233 SFLD Main (cytGST) 1 227 - -
Trre16g02251 233 SFLD Main.3: Omega- and Tau-like 1 227 IPR045073 -
Trre16g02251 233 SUPERFAMILY Thioredoxin-like 6 110 IPR036249 -
Trre16g02251 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 214 IPR045073 -
Trre16g02251 233 Gene3D - 88 229 - -
Trre16g02251 233 Gene3D Glutaredoxin 1 87 - -
Trre16g02251 233 CDD GST_C_Tau 93 222 IPR045074 GO:0004364|GO:0006749
Trre16g02251 233 FunFam Glutathione S-transferase U9 88 229 - -
Trre16g02251 233 CDD GST_N_Tau 6 81 - -
Trre16g02251 233 FunFam Glutathione S-transferase GSTU6 1 88 - -
Trre16g02251 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Trre16g02251 233 Pfam Glutathione S-transferase, C-terminal domain 100 203 IPR004046 -
Trre16g02251 233 SUPERFAMILY GST C-terminal domain-like 87 220 IPR036282 -
Trre16g02251 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 228 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02251 Trre-Chr16 18370841 18372253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02251 1 220 Glutathione S-transferase Gene Family AT1G10360 58.371 2.36e-90 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02251 K00799 - cam:101508281 395.201