Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02246 ATGATGTTTGTGCCTTGGCTAGAAAAGTTGTTGGCAATCACAACCTTTTTCACAGCATGTGAAGTCCACTCCGACGAATCCAAAATTGAGTGTAACAAGTTCTGGTGCATCGATTGTTATGAGAATGCATTATGTCAATCTTGCATAACAACTAGTCACAAAGGTCATCGAGTAATTCAAATAAGGAGGTTATCTTATAACGAGGCAATCAAGACAATTGAAATTTACAAGCATGTGGACATCCTTGGAATTCAAACATATCTTATTAATAACTCTACGGCCGTATTCATAAACAAGAGGCCTCTTCCACAACCTAAGAACAACAAGAATGGTAAAAATGGTTACACCAGCATCTCATGTTGTAAGACATGCAAAAGAAATCTTGTGGATTCTTCTTACTTTTGCTCTTTGGCATGCAAGTTTGCATATATAAAGAAGAATGGGGGCTTTTTCGTAAGCGCAAAAGAGATGGAAGAAATGAAAAGATTAATAGAGGAATCGATCAAGGAATCCCCACCAAAAGAAAGAGCAAAAAAATTACGTGAACAAAATCTAAAACTCAAAGTTGATGAATCAAGAATTGATGAAGAATATGAAGATGATGAAGAGAAAGAAGAGAAAGAAGAAGATAATAAAGAAGAAAACCAAGACAACAGAGAAAGTGTTCTTCCTGTTACTCGTCCATCGGCTTCATTTCGTAAGCCAAATTCAAGAAGAAAAGGAATACCTCATAGGGCTCCTTTTTATTAA 750 0.3587 MMFVPWLEKLLAITTFFTACEVHSDESKIECNKFWCIDCYENALCQSCITTSHKGHRVIQIRRLSYNEAIKTIEIYKHVDILGIQTYLINNSTAVFINKRPLPQPKNNKNGKNGYTSISCCKTCKRNLVDSSYFCSLACKFAYIKKNGGFFVSAKEMEEMKRLIEESIKESPPKERAKKLREQNLKLKVDESRIDEEYEDDEEKEEKEEDNKEENQDNRESVLPVTRPSASFRKPNSRRKGIPHRAPFY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02246 249 Pfam PLATZ transcription factor 62 140 IPR006734 -
Trre16g02246 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 248 - -
Trre16g02246 249 Coils Coil 195 218 - -
Trre16g02246 249 MobiDBLite consensus disorder prediction 194 210 - -
Trre16g02246 249 MobiDBLite consensus disorder prediction 191 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02246 Trre-Chr16 18320250 18321937 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre16g02246 PLATZ 4.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02246 - - cam:101499108 298.13