Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02174 ATGGAGGCATATTGGTCAATTGTACTTGTTTTTCTGTGTATTTCAATACTTATTATAGTTAGAATATTTCAATTGTACTTGACATCCATTCAACTCCCTCCGGGACCCTTTCACTTTCCTATCATTTCCGACATCTTTTGGCTGCGAAAATCATTCTCAGAAATCGAACCAATTATTTGCAACCTCCATGCCAAACATGGCCCTATCATCTCATTCCACTTTTGGTCTAATCCCCATGTTTCCATATCCGATCGTTTCCTCGCCCACAAGGCCTTAATCCAAAACGGTGCCATATTCGCTGACCGCCCCAAAACGCTTACTCTAACCAAACCACTCAACATTGCCTCCTCTTGTTACGGCCCCACATGGCGTGTTCTCCGCAATAATCTCGCCACTACAATGCTTCACCCATCGCGGTTCAATTCCTTCTCTAACACTCGCAAATGTGTTATGGATGCACTAGTCAAGCAATTAAAATCTGAAGCTGCATCGAACTATTCTGTTAAGTTCATCAATCACATTCATCATGCAATTTTTAGCTTACTAGTTTTTATGTGTTTCGGTGAAAAAGTTGACAGCGAGAAAATTGAAGTCATTAAGGATGTCCAACGCCTTTGGATTATAAGCTCCGGAAAATTCGGTGTGCTTAATTATTTTCCAAAAGCAATCTCTCACATGTTGTTCCGAAAGCGTTGGAATGAGTTTCTGCATCTTCAAAAGGATCAAAAAGATGTATTTATTGAACTAATAAGAGCGAGAGAAAAAGAAAATAATAAAAATAGTATCGATGATGAAAGTTTCATTTGTTATGTTGATACCTTGTTGAATATACAATTGCCTGAGGAAAAGCGGAAGCTTGATGACGATGAACTTGTTGCACTCTGTTCAGAGTTTCTAACTGCAGGAACGGATACAACTTCATCTGCATTGGAGTGGGTTATGGCAAATTTGGTGAAATATGGACATGTGCAACAGAGGATAGTAGAGGAAATTGGAGAGGTGGTTCGTCATAGAGAGGAAAGAGAAGTAAAAGAGGAAGATTTGGAGAAGTTACCTTATCTTAAGGCTGTGATTTTGGAAGGGTTAAGGCGCCACCCTCCTTCTCACTACTTAATTCCACATGCAGTGACTGAGGATGTGATTTTTAATGGTTACTTGGTGCCTAAAAATGGGACAATTAATTTTATGGTGGCAGAGGTTGGGTGGGATCCAACAGCTTGGGAGGATCCAATGGCGTTCAAGCCAGAGAGGTTTGAGGAAAGTAGTAGCGGATTTGATGTTACTAGTCAAACTGAGATAAAGATGATGCCATTTGGAGCAGGGAGAAGGATTTGTCCTGCTTATCACTTGGCAATGCTCCATTTGGAATACTTCGTGGCAAATTTGGTTTGGAACTTTGAATGGAAAACTTTATCACCTGAAAGTAATGTTGATTTGTCAGAAAAACAAGAATTTACTATGGTGATGAAACATCCATTGGAAGCTCAAATATCTCCTAGGAACTAG 1506 0.3991 MEAYWSIVLVFLCISILIIVRIFQLYLTSIQLPPGPFHFPIISDIFWLRKSFSEIEPIICNLHAKHGPIISFHFWSNPHVSISDRFLAHKALIQNGAIFADRPKTLTLTKPLNIASSCYGPTWRVLRNNLATTMLHPSRFNSFSNTRKCVMDALVKQLKSEAASNYSVKFINHIHHAIFSLLVFMCFGEKVDSEKIEVIKDVQRLWIISSGKFGVLNYFPKAISHMLFRKRWNEFLHLQKDQKDVFIELIRAREKENNKNSIDDESFICYVDTLLNIQLPEEKRKLDDDELVALCSEFLTAGTDTTSSALEWVMANLVKYGHVQQRIVEEIGEVVRHREEREVKEEDLEKLPYLKAVILEGLRRHPPSHYLIPHAVTEDVIFNGYLVPKNGTINFMVAEVGWDPTAWEDPMAFKPERFEESSSGFDVTSQTEIKMMPFGAGRRICPAYHLAMLHLEYFVANLVWNFEWKTLSPESNVDLSEKQEFTMVMKHPLEAQISPRN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02174 501 Gene3D Cytochrome P450 28 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 492 - -
Trre16g02174 501 SUPERFAMILY Cytochrome P450 33 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 CDD CYP77_89 65 493 - -
Trre16g02174 501 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 Pfam Cytochrome P450 33 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 FunFam Cytochrome P450 family protein 27 501 - -
Trre16g02174 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Trre16g02174 501 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g02174 501 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02174 Trre-Chr16 17541167 17542672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02174 5 501 Cytochrome P450 AT1G64940 49.023 1.74e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02174 K24184 - gmx:100795683 590.497