Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02161 ATGGCATCAAGATCCTATGCTAATCTCTTAGACTTAGCTGGTGGAGGAGACTTGCTTGATATTCCTCACACCCCAAGAACTCTTCCAAGGGTTATGACTGTTCCTGGAATTATTTCTGACCTGGATGGTGATTCAGATGTTAGTTCTTCTGGATGTCGAGAGCGAAAAATCATTGTGGCAAACATGTTGCCACTGCAGGCTAAAAGAGATATTGAAACTGGTAAATGGTGTTTCAGTTGGGACGAGGATTCAATTCTATTACAATTAAAAGATGGGTTTTCTTCTGATACTGAAGTAATCTATGTGGGTTCCCTCAAGGTGGAGATAGATACTAGTGAGCAGGATGCAGTTGCTCAGAAATTACTGGATGACTTTAATTGTGTGCCCACCTTTCTACCCCATGAGCTGCAGAGAAAGTTCTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCTCTCATTCATTATATGCTACCTATATGCTCAGATCATGGTGATCGCTTTGACCGCACACTTTGGCAGGCTTATGTATCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAGTGATTAATCCCGATGATGATTTTGTTTGGGTTCATGACTACCATTTGATGGTTTTGCCTACTTTCTTGAGGAAACGATTCAATCGAGTTAAACTTGGATTTTTTCTTCATAGTCCTTTCCCATCGTCTGAAATTTACCGGACTTTGCCAGTAAGGGATGAAATTCTGAAGGGATTGTTGAATTCGGATTTAATTGGTTTTCATACATTTGATTACGCTCGCCACTTTCTTTCTTGCTGCAGTAGAATGTTAGGTCTGGACTATGAATCTAAGCGCGGACATATAGGACTTGATTACTTCGGCCGCACTATATTTATCAAAATTTTGCCTGTAGGCATTCACATGGGTAGGCTTGACTCTGTATTAAATCTTCCTTCTACATCCTCTAAACTAAAAGAGATTCAGGAAGAGTTTAAGGATAAGAAAGTTATTCTGGGTGTTGATGACATGGATATTTTTAAGGGTATCAATCTGAAGTTTCTAGCTGTGGAGCAGCTGCTGCAGCAGAATCCAAATTTGCAGGGTAAAGTTGTCCTAATTCAAGTTGTAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAGGAAGCATATTCAATTGCTCAAAGGATCAATGATAGATATGGTTCAAATGATTATCAGCCAGTCATTATCATTGACCGTCATGTTCCTCGTTTTGAAAAGAGTGCCTATTATGCTGTTGCTGAGTGCTGCATTGTCAATGCTGTAAGGGATGGGATGAACTTAGTCCCATACAAATATATTGTCTGCAGGCAGGGAACTCCCAAGCTGGACGAAGCTGTGGGTAGAAAAAGTGATTGTCCTCGGACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCGCCTTCTCTGAGTGGGGCCATTAGGGTCAATCCTTGGGATATAGATGCAGTTGCTGATGCTCTGAATTTGGCCCTCACTATTGTGGAGCCAGAGAAGAAGTTGCGTCATGAGAAACACTATCGATATGTTAGTACTCATGACGTGGCATATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCATGCAAAGATCACTACACAAAAAGGTGCTGGGGAATTGGTTTGGGCTTGGGGTTTAGAGTTATTTCTCTTTCTCATGGTTTTAGGAAGTTGTCCATTGACCATATTGTATCAGCATACAAAAGAACCAGTAGAAGGGCTATCTTTCTTGATTATGATGGCACTATTGTATCACAATCTTCTATTAATAAAACCCCCAGCCCTGAAGTCATATCTGTGATTAATGCTCTGTGTAACGATACCAAGAATATTGTGTTTATTGTTAGTGGAAGGGCAAGAGATTCTCTGAGTGAATGGTTTACTTCATGCAAACTGCTTGGACTTGCAGCTGAACATGGGTACTTCCTAAGGTGGAATAGTGACTCTGAATGGGAAACCAGTCATTTCTCTGCGGACCTTGATTGGAAACAGATAGTGTTGCCTGTCATGCAGTCGTATACAGAAGCAACTGATGGATCTAACATCGAAGTTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCTGACCCTGATTTTGGTTCCTGCCAAGCCAAGGAATTGTTGGATCACTTGGAAAGTGTTCTTGCTAATGAACCAGCACTTGTTAAGAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGGAGTAACCAAAGGTCTGGTAGCTGAAAAGGTTCTTTTGAATATGGTTAATGGCGGCAACCCACCAGATTTTGTGATGTGCATCGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGCACAGTCTCGTGCCCATCGTTACCAGCAGCTCCGGATATTTTTGCTTGCACTGTAGGAAGGAAGCCTAGCAAGGCCAAGTATTTCCTTGATGATACTTCTGATGTTGTAAGGTTGCTTCAAGGTCTTGCTGCCTCATCAAATCCAACAAAGCCCAGGCATCTTGCCCAATTCCAGGTTTCTTTTGAGAGCACGGTTTCTTAG 2577 0.4191 MASRSYANLLDLAGGGDLLDIPHTPRTLPRVMTVPGIISDLDGDSDVSSSGCRERKIIVANMLPLQAKRDIETGKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKVEIDTSEQDAVAQKLLDDFNCVPTFLPHELQRKFYLGFCKQQLWPLIHYMLPICSDHGDRFDRTLWQAYVSANKIFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLDSVLNLPSTSSKLKEIQEEFKDKKVILGVDDMDIFKGINLKFLAVEQLLQQNPNLQGKVVLIQVVNPARGSGKDVQEAKKEAYSIAQRINDRYGSNDYQPVIIIDRHVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPKLDEAVGRKSDCPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALNLALTIVEPEKKLRHEKHYRYVSTHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVISLSHGFRKLSIDHIVSAYKRTSRRAIFLDYDGTIVSQSSINKTPSPEVISVINALCNDTKNIVFIVSGRARDSLSEWFTSCKLLGLAAEHGYFLRWNSDSEWETSHFSADLDWKQIVLPVMQSYTEATDGSNIEVKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPALVKRGQHIVEVKPQGVTKGLVAEKVLLNMVNGGNPPDFVMCIGDDRSDEDMFESILSTVSCPSLPAAPDIFACTVGRKPSKAKYFLDDTSDVVRLLQGLAASSNPTKPRHLAQFQVSFESTVS 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02161 858 Pfam Trehalose-phosphatase 590 825 IPR003337 GO:0003824|GO:0005992
Trre16g02161 858 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 586 703 - -
Trre16g02161 858 CDD GT20_TPS 57 540 IPR001830 GO:0003824|GO:0005992
Trre16g02161 858 CDD HAD_TPP 588 829 - -
Trre16g02161 858 NCBIfam HAD-IIB family hydrolase 588 789 IPR006379 -
Trre16g02161 858 Pfam Glycosyltransferase family 20 55 540 IPR001830 GO:0003824|GO:0005992
Trre16g02161 858 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 55 544 - -
Trre16g02161 858 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 48 307 - -
Trre16g02161 858 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 716 847 - -
Trre16g02161 858 Gene3D Glycogen Phosphorylase B; 49 307 - -
Trre16g02161 858 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 835 IPR001830 GO:0003824|GO:0005992
Trre16g02161 858 Gene3D - 586 702 IPR023214 -
Trre16g02161 858 Gene3D - 716 847 IPR023214 -
Trre16g02161 858 NCBIfam trehalose-phosphatase 585 834 IPR003337 GO:0003824|GO:0005992
Trre16g02161 858 FunFam Alpha,alpha-trehalose-phosphate synthase 309 524 - -
Trre16g02161 858 SUPERFAMILY HAD-like 587 835 IPR036412 -
Trre16g02161 858 Gene3D Glycogen Phosphorylase B; 308 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02161 Trre-Chr16 17420796 17423551 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02161 1 857 Trehalose Biosynthesis Gene Families AT1G23870 75.461 0.0 1380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02161 K16055 - gmx:100775779 1544.25