Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02160 ATGGCATCAAGATCCTATGCTAATCTCTTAGACTTAGCTGGTGGAGGAGACTTGCTTGATATTCCTCACACCCCAAGAACTCTTCCAAGGGTTATGACTGTTCCTGGAATTATTTCTGACCTGGATGGTGATTCAGATGTTAGTTCTTCTGGATGTCGAGAGCGAAAAATCATTGTGGCAAACATGTTGCCACTGCAGGCTAAAAGAGATATTGAAACTGGTAAATGGTGTTTCAGTTGGGACGAGGATTCAATTCTATTACAATTAAAAGATGGGTTTTCTTCTGATACTGAAGTAATCTATGTGGGTTCCCTCAAGGTGGAGATAGATACTAGTGAGCAGGATGCAGTTGCTCAGAAATTACTGGATGACTTTAATTGTGTGCCCACCTTTCTACCCCATGAGCTGCAGAGAAAGTTCTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCTCTCATTCATTATATGCTACCTATATGCTCAGATCATGGTGATCGCTTTGACCGCACACTTTGGCAGGCTTATGTATCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAGTGATTAATCCCGATGATGATTTTGTTTGGGTTCATGACTACCATTTGATGGTTTTGCCTACTTTCTTGAGGAAACGATTCAATCGAGTTAAACTTGGATTTTTTCTTCATAGTCCTTTCCCATCGTCTGAAATTTACCGGACTTTGCCAGTAAGGGATGAAATTCTGAAGGGATTGTTGAATTCGGATTTAATTGGTTTTCATACATTTGATTACGCTCGCCACTTTCTTTCTTGCTGCAGTAGAATGTTAGGTCTGGACTATGAATCTAAGCGCGGACATATAGGACTTGATTACTTCGGCCGCACTATATTTATCAAAATTTTGCCTGTAGGCATTCACATGGGTAGGCTTGACTCTGTATTAAATCTTCCTTCTACATCCTCTAAACTAAAAGAGATTCAGGAAGAGTTTAAGGATAAGAAAGTTATTCTGGGTGTTGATGACATGGATATTTTTAAGGGTATCAATCTGAAGTTTCTAGCTGTGGAGCAGCTGCTGCAGCAGAATCCAAATTTGCAGGGTAAAGTTGTCCTAATTCAAGTTGTAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAGGAAGCATATTCAATTGCTCAAAGGATCAATGATAGATATGGTTCAAATGATTATCAGCCAGTCATTATCATTGACCGTCATGTTCCTCGTTTTGAAAAGAGTGCCTATTATGCTGTTGCTGAGTGCTGCATTGTCAATGCTGTAAGGGATGGGATGAACTTAGTCCCATACAAATATATTGTCTGCAGGCAGGGAACTCCCAAGCTGGACGAAGCTGTGGGTAGAAAAAGTGATTGTCCTCGGACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCGCCTTCTCTGAGTGGGGCCATTAGGGTCAATCCTTGGGATATAGATGCAGTTGCTGATGCTCTGAATTTGGCCCTCACTATTGTGGAGCCAGAGAAGAAGTTGCGTCATGAGAAACACTATCGATATGTTAGTACTCATGACGTGGCATATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCATGCAAAGATCACTACACAAAAAGGTGCTGGGGAATTGGTTTGGGCTTGGGGTTTAGAGTTATTTCTCTTTCTCATGGTTTTAGGAAGTTGTCCATTGACCATATTGTATCAGCATACAAAAGAACCAGTAGAAGGGCTATCTTTCTTGATTATGATGGCACTATTGTATCACAATCTTCTATTAATAAAACCCCCAGCCCTGAAGTCATATCTGTGATTAATGCTCTGTGTAACGATACCAAGAATATTGTGTTTATTGTTAGTGGAAGGGCAAGAGATTCTCTGAGTGAATGGTTTACTTCATGCAAACTGCTTGGACTTGCAGCTGAACATGGGTACTTCCTAAGGTGGAATAGTGACTCTGAATGGGAAACCAGTCATTTCTCTGCGGACCTTGATTGGAAACAGATAGTGTTGCCTGTCATGCAGTCGTATACAGAAGCAACTGATGGATCTAACATCGAAGTTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCTGACCCTGATTTTGGTTCCTGCCAAGCCAAGGAATTGTTGGATCACTTGGAAAGTGTTCTTGCTAATGAACCAGCACTTGTTAAGAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGGAGTAACCAAAGGTCTGGTAGCTGAAAAGGTTCTTTTGAATATGGTTAATGGCGGCAACCCACCAGATTTTGTGATGTGCATCGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGCACAGTCTCGTGCCCATCGTTACCAGCAGCTCCGGATATTTTTGCTTGCACTGTAGGAAGGAAGCCTAGCAAGGCCAAGTATTTCCTTGATGATACTTCTGATGTTGTAAGGTTGCTTCAAGGTCTTGCTGCCTCATCAAATCCAACAAAGCCCAGGCATCTTGCCCAATTCCAGTGCAACTTTGCTGTTGTGGAACATGATTCTTTTGTTACTCCTGAACCGGTTTGCATGGCATCTGGAAGGTTGCGGTGCGGTTCATGGACGGTCTGA 2646 0.4218 MASRSYANLLDLAGGGDLLDIPHTPRTLPRVMTVPGIISDLDGDSDVSSSGCRERKIIVANMLPLQAKRDIETGKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKVEIDTSEQDAVAQKLLDDFNCVPTFLPHELQRKFYLGFCKQQLWPLIHYMLPICSDHGDRFDRTLWQAYVSANKIFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLDSVLNLPSTSSKLKEIQEEFKDKKVILGVDDMDIFKGINLKFLAVEQLLQQNPNLQGKVVLIQVVNPARGSGKDVQEAKKEAYSIAQRINDRYGSNDYQPVIIIDRHVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPKLDEAVGRKSDCPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALNLALTIVEPEKKLRHEKHYRYVSTHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVISLSHGFRKLSIDHIVSAYKRTSRRAIFLDYDGTIVSQSSINKTPSPEVISVINALCNDTKNIVFIVSGRARDSLSEWFTSCKLLGLAAEHGYFLRWNSDSEWETSHFSADLDWKQIVLPVMQSYTEATDGSNIEVKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPALVKRGQHIVEVKPQGVTKGLVAEKVLLNMVNGGNPPDFVMCIGDDRSDEDMFESILSTVSCPSLPAAPDIFACTVGRKPSKAKYFLDDTSDVVRLLQGLAASSNPTKPRHLAQFQCNFAVVEHDSFVTPEPVCMASGRLRCGSWTV 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02160 881 CDD HAD_TPP 588 829 - -
Trre16g02160 881 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 586 703 - -
Trre16g02160 881 Gene3D Glycogen Phosphorylase B; 49 307 - -
Trre16g02160 881 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 835 IPR001830 GO:0003824|GO:0005992
Trre16g02160 881 Pfam Trehalose-phosphatase 590 825 IPR003337 GO:0003824|GO:0005992
Trre16g02160 881 NCBIfam trehalose-phosphatase 585 834 IPR003337 GO:0003824|GO:0005992
Trre16g02160 881 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 716 847 - -
Trre16g02160 881 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 55 544 - -
Trre16g02160 881 Gene3D Glycogen Phosphorylase B; 308 524 - -
Trre16g02160 881 FunFam Alpha,alpha-trehalose-phosphate synthase 309 524 - -
Trre16g02160 881 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 48 307 - -
Trre16g02160 881 CDD GT20_TPS 55 540 IPR001830 GO:0003824|GO:0005992
Trre16g02160 881 SUPERFAMILY HAD-like 587 835 IPR036412 -
Trre16g02160 881 Gene3D - 586 702 IPR023214 -
Trre16g02160 881 Gene3D - 716 847 IPR023214 -
Trre16g02160 881 NCBIfam HAD-IIB family hydrolase 588 789 IPR006379 -
Trre16g02160 881 Pfam Glycosyltransferase family 20 55 540 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02160 Trre-Chr16 17420796 17423745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02160 1 862 Trehalose Biosynthesis Gene Families AT1G23870 75.115 0.0 1375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02160 K16055 - gmx:100775779 1534.24