Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g02119 | ATGGCTCCAAAAGATGAAGAAAATTCTTCTACACTTGTTCCTTTTGATCCTAAGAAACAATTTGGAAAGGGAGTAAATCTTGACGTGGAAATAGCTCCGCCACCTAATTCCAAACCTCCGGAAAGTTCTCCGTCGAAATTGTCACCGCCACCACCGTCTAAATCTCCTTCGCCTTCACCGCCACCGCCAACACATTCACCACCACCACCTTCTCCTCCACCAAATTCGCCACCTCCATCACCATCACCGCCACCTCAGTCACCGTCTCCACCGCCACCCTCTCCTCCACCGCAGCAACTGTCACCACCACCTTTGCACAACTCTTCATCTCCTTCACGTAAAAATCCATCTCCATCTCCACCTCAGTTTCAATCCCCACCTTCCTTGGGGAAGAAGTCTTCTTCATCTTCTTCTTCTTCACCCTCGAATGATTCACCTTCTTCTTCTTCTTCTTCGCCCAAGAAAGATTCACCTTCTTCTTCTTCTTCTTCTTCAGCCTCGAATGATTCACCGCATAAAGCCTTGCATGCTAAATCAAGAGATTCTTCTCCGCCTAGCTCATCGCCCGCCGAAATAGTTGGTTACACCCTCGCCGGAGTTTTTGTTTTTGCCTTAGTTGCTGTAGCTGTTATTCTCGTGTGTAGGAGGAAGAAAACCAAAGGAGATGTGTATGGTGCACCCTATATACCACCTCATGGTATTAGTTTTCATGTTAAATCAAGTGATGGACATTACTATGTACAGCAACCGAATTCGTTTCAAAATATCTATAGCAATGGGAACATTGGAGGAAGCGGCATAAATCCTTTAGGAGGAGGTCATTTAGATTCGGCGCAGCCCATAAGTGCTCAAATAGTTTTTAGTTATGAGATGGTAATGGAAATAACCAATGCTTTTTCACGTCAAAATGTGATAGGGGAAGGAGGATTTGGGTGTGTTTACAAGGGTAGGCTGCTGGATGGAAAAGAAGTTGCGGTCAAGACTCTTAAGGCTGGTAGTGGGCAGGGAGATAGGGAATTTAGGGCTGAAGTTGAGATCATTAGCCGTGTTCATCATCGACATTTGGTATCGTTGGTTGGTTATTGCATATCAGAGCAGCAAAGAATGCTTATCTATGAGTTCCTCCCTAACGGAAATCTTCATAATCACTTGCATGGAAGTGGAATGCCAGTGTTGGGGTGGGCCAATAGGCTGAAGATAGCTATTGGTGCTGCAAAGGGTTTGGCATATCTGCATGAGGACTGCAGCCAAAAGATTATTCACAGAGATATTAAATCCGCCAACATACTTTTGGATGATGCTTTTGAGGCACAGGTTGCAGACTTTGGACTTGCAAGGCTAGCTGATGCTGCTAATACACATGTATCAACTAGGGTTATGGGTACATTTGGGTACATGGCTCCGGAGTATGCAACAAGTGGAAAATTAACAGATAGATCAGATGTTTTCTCATTTGGCGTTGTCCTGCTTGAGCTTGTAACTGGAAGAAAACCAGTTGATGAAACTATGCCTTTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCATTACTTATCCATGCATTTGAGACACGTGAGTTTGGTGAACTAGTAGATCCAAGACTAGAAAAACACTATGTGGAGAGTGAAATGTTCAGAATGATAGAGGCAGCTGCAGCTTGTGTTCGACACTCAGCCCCTAAACGGCCTCGTATGTCTCAGGTGGTAAGAGCTTTAGACTCTGGAGATGAAATATCTGATTTATCAAATGGGGTGAAATATGGTCATAGCACAGTTTATGATTCTGGCCAATATGACAAAGACATCATGCTATTCAGGATGATGGGCAATGGCAGCTATGGTGATTCTTCTGATTATGATATATACAGTGCAGAATCCAGTCATTCAAGAGAGTATTCGAGATCACGGCATGCATGGATGCATAGTGGTTCGAGTACCGAGTCAGAATCTAGAGCTTTCAATAGCCATAGATGCAGTAGTACTGACTGA | 1989 | 0.4434 | MAPKDEENSSTLVPFDPKKQFGKGVNLDVEIAPPPNSKPPESSPSKLSPPPPSKSPSPSPPPPTHSPPPPSPPPNSPPPSPSPPPQSPSPPPPSPPPQQLSPPPLHNSSSPSRKNPSPSPPQFQSPPSLGKKSSSSSSSSPSNDSPSSSSSSPKKDSPSSSSSSSASNDSPHKALHAKSRDSSPPSSSPAEIVGYTLAGVFVFALVAVAVILVCRRKKTKGDVYGAPYIPPHGISFHVKSSDGHYYVQQPNSFQNIYSNGNIGGSGINPLGGGHLDSAQPISAQIVFSYEMVMEITNAFSRQNVIGEGGFGCVYKGRLLDGKEVAVKTLKAGSGQGDREFRAEVEIISRVHHRHLVSLVGYCISEQQRMLIYEFLPNGNLHNHLHGSGMPVLGWANRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDDAFEAQVADFGLARLADAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDETMPLGDESLVEWARPLLIHAFETREFGELVDPRLEKHYVESEMFRMIEAAAACVRHSAPKRPRMSQVVRALDSGDEISDLSNGVKYGHSTVYDSGQYDKDIMLFRMMGNGSYGDSSDYDIYSAESSHSREYSRSRHAWMHSGSSTESESRAFNSHRCSSTD | 662 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g02119 | 662 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 419 | 431 | IPR008271 | GO:0004672|GO:0006468 | |
Trre16g02119 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 375 | 588 | - | - | |
Trre16g02119 | 662 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 200 | 624 | IPR047117 | - | |
Trre16g02119 | 662 | FunFam | proline-rich receptor-like protein kinase PERK8 | 375 | 587 | - | - | |
Trre16g02119 | 662 | MobiDBLite | consensus disorder prediction | 1 | 189 | - | - | |
Trre16g02119 | 662 | FunFam | Proline-rich receptor-like protein kinase PERK8 | 274 | 374 | - | - | |
Trre16g02119 | 662 | SMART | serkin_6 | 299 | 572 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre16g02119 | 662 | CDD | STKc_IRAK | 305 | 573 | - | - | |
Trre16g02119 | 662 | ProSiteProfiles | Protein kinase domain profile. | 299 | 592 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre16g02119 | 662 | MobiDBLite | consensus disorder prediction | 33 | 104 | - | - | |
Trre16g02119 | 662 | ProSitePatterns | Protein kinases ATP-binding region signature. | 305 | 327 | IPR017441 | GO:0005524 | |
Trre16g02119 | 662 | MobiDBLite | consensus disorder prediction | 126 | 172 | - | - | |
Trre16g02119 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 280 | 572 | IPR011009 | - | |
Trre16g02119 | 662 | MobiDBLite | consensus disorder prediction | 640 | 662 | - | - | |
Trre16g02119 | 662 | Pfam | Protein tyrosine and serine/threonine kinase | 302 | 572 | IPR001245 | GO:0004672|GO:0006468 | |
Trre16g02119 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 275 | 374 | - | - | |
Trre16g02119 | 662 | PRINTS | Proline rich extensin signature | 40 | 61 | - | - | |
Trre16g02119 | 662 | PRINTS | Proline rich extensin signature | 63 | 79 | - | - | |
Trre16g02119 | 662 | PRINTS | Proline rich extensin signature | 80 | 97 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g02119 | Trre-Chr16 | 17110987 | 17114538 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g02119 | 192 | 627 | Trihelix Transcription Factor Family | AT1G70460 | 64.889 | 0.0 | 570 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_PERK-1 | Trre16g02119 | PK_Tyr_Ser-Thr | 4.7e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre16g02119 | - | - | gmx:100797563 | 642.114 |