Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02096 ATGGGGTTACACAACAATCCTAGAACAACAAATGAAATTGTTGTAGAACAACATTGTCCATTGTTACATAGTACTAAAAAAGATGAGAAAATTGAAGTTGAAATTCAACAAAATGATGATAATGGATCCATTTGTAACAATAATGGGTCATCAGCATCATTTACAGGTTCTGTATTCAATTTATCAACAACAATTATTGGTGCTGGAATCATGGCTTTACCTGCAGCCATGAAAGTTTTGGGTTTAACCATTGGTATTGCTTCAATAATCTTCTTTGCTTTGTTGAGTCATACTTCTTTGGATATTCTCATGAGGTTTAGTAGAGTTGCTAAGGCTCAATCTTATGGTGATATTATGGGATGTGCTTTTGGAAGTGTTGGAAGATTGGTTTTTCAGATTTCTGTTCTTGTTAATAATTTTGGTATTCTTGTTGTCTACAGCATCATAATTGGTGATGTACTGTCTGGAACAACTTCATCAGGAAATCATCATTTCGGTGTACTTGAAGGATGGTTCGGCGAACACTGGTCGACTGGCCGGACTTTTGTTCTTCTTGTGACAACCCTTTTGGTATTTACTCCATTGGGATTCTTTAAGAGAATAGATTCATTAAGATATACTTCTGGTTTAGCAGTGGCTTTGGCAATTGTTTTTCTTGTTATAACTGCAGGAATCACTTTTGTTAAATTGTTCAATGGAAGTATAGAGAGTCCAAGATTGCTTCCTAATATTACTGATATCACATCTATTTGGAATCTATTCACAGCAGTTCCTGTTCTTGTCACAGCATTTGTTTGTCATTATAATGTGCATACAATAGACAATGAACTTGGAGACTCTTCACCAATACAACCAGTTATATGTGCATCATTGGTTCTATGTTCTGGCATATACATTCTTACAGCTTTATTTGGATTTCTACTATTCGGTGACGCAACTCTTGGTGATGTACTGGCCAACTTTGATACTGATCTTGGTATCCCTTATAGTAATGTGCTCAACGATATTGTTCGTATAAGCTACGCCCTTCACCTTATGCTTGTTTTCCCAGTTATCTTCTTTTCGCTCCGCTTCAATTTGGATGATCTTGTGTTTCCGTCAGCCAAGTCATTGGAATTTGATAAGTTCAGGTTTTCATTGATCACTACTGGACTCATTGTTTTGCTCTATGTGGCTGCAAATTTTGTGCCTAGCATTTGGGATGTTTTTCAATTCACAGGAGCAACTGCTACTGTTTGCCTCGGTTTTATTTTCCCTGCTGCAATTGCTCTAAGGGATCCACAAAGCATTGCAACTAAGAAGGACAAAATTTTATCCATTGTGATGATTGTTCTTGCTGTGTTTGCAAATGTTGTGGCTATATACAGTAATGCTGATGCTTTGTTCAGAAAACAAAGTAAATCAAATTGA 1410 0.3638 MGLHNNPRTTNEIVVEQHCPLLHSTKKDEKIEVEIQQNDDNGSICNNNGSSASFTGSVFNLSTTIIGAGIMALPAAMKVLGLTIGIASIIFFALLSHTSLDILMRFSRVAKAQSYGDIMGCAFGSVGRLVFQISVLVNNFGILVVYSIIIGDVLSGTTSSGNHHFGVLEGWFGEHWSTGRTFVLLVTTLLVFTPLGFFKRIDSLRYTSGLAVALAIVFLVITAGITFVKLFNGSIESPRLLPNITDITSIWNLFTAVPVLVTAFVCHYNVHTIDNELGDSSPIQPVICASLVLCSGIYILTALFGFLLFGDATLGDVLANFDTDLGIPYSNVLNDIVRISYALHLMLVFPVIFFSLRFNLDDLVFPSAKSLEFDKFRFSLITTGLIVLLYVAANFVPSIWDVFQFTGATATVCLGFIFPAAIALRDPQSIATKKDKILSIVMIVLAVFANVVAIYSNADALFRKQSKSN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02096 469 Pfam Transmembrane amino acid transporter protein 52 454 IPR013057 -
Trre16g02096 469 PANTHER AMINO ACID TRANSPORTER 48 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02096 Trre-Chr16 16957349 16960668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02096 4 469 Amino Acid or Auxin Permease AAAP Family AT3G30390 59.013 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02096 K14207 - gmx:100778699 684.871