Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02077 ATGAATTTAGGATTTTGGAAGAGAGCTTTGGAGTCAAAAAAAGATTCAAATTATACCTTTGATCTTTCTCTCTCTAATCCAAGGGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTACTACTACTACTACTTCAAATTCAAACCTCAACAATCTCATAACTCACAACACTTTTCTACCATTTCATCAAACCCTAAGTGAAGAGCTAGGTTTTCTCAAACCTATAAGAGGAATTCCAGTTTATAATCATCAAAACCCTCACCATCATCATCATCCTATTGGATTATTTTCTCAACCTTCTGTTTCAAGTTCAACAACAACTTTTCATTCTCAAGTACCATTGATTAGATCAAAGTTGTTGCCGCGGTTTCCTTCGAAGCGTAGCGTGAGAGCTCCAAGGATGCGTTGGACTACTACTCTTCATAATCGATTTGTTCATGCTGTTGAGCTTTTGGGTGGCCATGAAAGAGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTAACGTTATCACATGTTAAGTCACATTTGCAGATGTACCGGACGGTGAAAATTACAGATAGAGCAGCAGTATCACCAGGAATAGGACAATCTGAGTTGTATGAAAATGGTTCATCTGGAGACACTTCTGAAGACGTCATGTTTGACATAAACTCTTCAACAAGATCTAATGATCTTCCCATTAAATTGGATAAAGAAATTGCTAATCAAGATGAAGAAAATTGTGGCATTTGGAGAAACAACTCTTCAAGGGAAGCTTGGTTGCATGGTAACCCAAAGGTCCATCCTCTTGAAAATGTGTCTTCTCTTGAGGGAATGGATCCAAAGTATCTAAGCAACGAAAGAACTTCATCAGATGGAAGCTCTTCATCAAACATTTCAAGAACACACCTCAAGAAACCAAATTTAGATTTGGAATTCACCTTGGGCACGTCACTTTGA 951 0.3785 MNLGFWKRALESKKDSNYTFDLSLSNPRVSSSSSSSSSTTTTTTSNSNLNNLITHNTFLPFHQTLSEELGFLKPIRGIPVYNHQNPHHHHHPIGLFSQPSVSSSTTTFHSQVPLIRSKLLPRFPSKRSVRAPRMRWTTTLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKITDRAAVSPGIGQSELYENGSSGDTSEDVMFDINSSTRSNDLPIKLDKEIANQDEENCGIWRNNSSREAWLHGNPKVHPLENVSSLEGMDPKYLSNERTSSDGSSSSNISRTHLKKPNLDLEFTLGTSL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02077 316 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 25 314 IPR044847 GO:0000976|GO:0006355|GO:0010158
Trre16g02077 316 Gene3D - 131 188 - -
Trre16g02077 316 FunFam Myb family transcription factor 130 188 - -
Trre16g02077 316 Pfam Myb-like DNA-binding domain 133 184 IPR001005 -
Trre16g02077 316 MobiDBLite consensus disorder prediction 259 300 - -
Trre16g02077 316 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 185 IPR006447 GO:0003677
Trre16g02077 316 MobiDBLite consensus disorder prediction 24 49 - -
Trre16g02077 316 SUPERFAMILY Homeodomain-like 129 185 IPR009057 -
Trre16g02077 316 MobiDBLite consensus disorder prediction 281 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g02077 Trre-Chr16 16743222 16750874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02077 71 314 G2-like Transcription Factor Family AT4G17695 43.678 2.83e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre16g02077 Myb_DNA-binding 3.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g02077 - - aprc:113868756 336.65