Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g02041 ATGGGAGACGTGGCAAAGGACCTTACAGCTGGAACTGTTGGAGGGGCTGCACAATTGATAGTTGGACACCCTTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCTGGTCAACCTCTCAAGTATTCTGGCGCATTTGATGCCGTCAGGCAGACAATAGCAGCCGAAGGTCCAAGGGGTTTATACAAAGGTATGGGAGCCCCACTCGCTACGGTTGCAGCCTTCAATGCTCTCCTATTTACAGTTAGGGGACAAATGGAATCATTAGTGAGGTCCCATCCTGGTGCTCCCCTCACCGTGAATCAGCAGTTTGTTTGTGGAGCTGGAGCTGGTGTTGCTGTTTCCTTTCTTGCTTGCCCAACTGAATTAATCAAATGCAGGTTGCAAGCACAAAGTGCACTTGCTGGCACAGGAACTGCAGCTGTGGCCGTTAAATATGGAGGACCGATGGATGTGGCCAGGCAAGTTCTCCGGTCAGAAGGCGGTGTGAGAGGTCTTTTCAAAGGCTTGGTTCCCACGATGGCACGTGAGATACCTGGAAATGCAATAATGTTTGGCGTATATGAAGCATTAAAACAACGGTTTGCTGGTGGCACCGATACCTCTGGTCTAGGTAGAGGTTCTCTGATTGTTGCTGGAGGCTTGGCTGGAGGTTCTTTCTGGTTCCTTGTTTACCCAACCGATGTTATTAAAAGTGTGCTTCAAGTAGACGATTATAAGAACCCTAAGTTTTCTGGTTCATTTGATGCTTTCAGAAAGATTATGGCTTCTGAGGGATTCAAAGGCCTATATAAAGGTTTTGGTCCTGCAATGGGTAGAAGTGTTCCTGCAAATGCAGCATGCTTCTTAGCATATGAGATGACAAGATCAGCTTTAGGATGA 894 0.4776 MGDVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQPLKYSGAFDAVRQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMESLVRSHPGAPLTVNQQFVCGAGAGVAVSFLACPTELIKCRLQAQSALAGTGTAAVAVKYGGPMDVARQVLRSEGGVRGLFKGLVPTMAREIPGNAIMFGVYEALKQRFAGGTDTSGLGRGSLIVAGGLAGGSFWFLVYPTDVIKSVLQVDDYKNPKFSGSFDAFRKIMASEGFKGLYKGFGPAMGRSVPANAACFLAYEMTRSALG 297
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre16g02041 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Trre16g02041 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Trre16g02041 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Trre16g02041 297 Pfam Mitochondrial carrier protein 102 199 IPR018108 -
Trre16g02041 297 Pfam Mitochondrial carrier protein 4 94 IPR018108 -
Trre16g02041 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Trre16g02041 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Trre16g02041 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Trre16g02041 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
Trre16g02041 297 Gene3D Mitochondrial carrier domain 99 297 IPR023395 -
Trre16g02041 297 Gene3D Mitochondrial carrier domain 2 98 IPR023395 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre16g02041 Trre-Chr16 16341159 16342618 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g02041 22 296 Antiporters AT1G79900 33.929 6.11e-43 147