Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g02041 | ATGGGAGACGTGGCAAAGGACCTTACAGCTGGAACTGTTGGAGGGGCTGCACAATTGATAGTTGGACACCCTTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCTGGTCAACCTCTCAAGTATTCTGGCGCATTTGATGCCGTCAGGCAGACAATAGCAGCCGAAGGTCCAAGGGGTTTATACAAAGGTATGGGAGCCCCACTCGCTACGGTTGCAGCCTTCAATGCTCTCCTATTTACAGTTAGGGGACAAATGGAATCATTAGTGAGGTCCCATCCTGGTGCTCCCCTCACCGTGAATCAGCAGTTTGTTTGTGGAGCTGGAGCTGGTGTTGCTGTTTCCTTTCTTGCTTGCCCAACTGAATTAATCAAATGCAGGTTGCAAGCACAAAGTGCACTTGCTGGCACAGGAACTGCAGCTGTGGCCGTTAAATATGGAGGACCGATGGATGTGGCCAGGCAAGTTCTCCGGTCAGAAGGCGGTGTGAGAGGTCTTTTCAAAGGCTTGGTTCCCACGATGGCACGTGAGATACCTGGAAATGCAATAATGTTTGGCGTATATGAAGCATTAAAACAACGGTTTGCTGGTGGCACCGATACCTCTGGTCTAGGTAGAGGTTCTCTGATTGTTGCTGGAGGCTTGGCTGGAGGTTCTTTCTGGTTCCTTGTTTACCCAACCGATGTTATTAAAAGTGTGCTTCAAGTAGACGATTATAAGAACCCTAAGTTTTCTGGTTCATTTGATGCTTTCAGAAAGATTATGGCTTCTGAGGGATTCAAAGGCCTATATAAAGGTTTTGGTCCTGCAATGGGTAGAAGTGTTCCTGCAAATGCAGCATGCTTCTTAGCATATGAGATGACAAGATCAGCTTTAGGATGA | 894 | 0.4776 | MGDVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQPLKYSGAFDAVRQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMESLVRSHPGAPLTVNQQFVCGAGAGVAVSFLACPTELIKCRLQAQSALAGTGTAAVAVKYGGPMDVARQVLRSEGGVRGLFKGLVPTMAREIPGNAIMFGVYEALKQRFAGGTDTSGLGRGSLIVAGGLAGGSFWFLVYPTDVIKSVLQVDDYKNPKFSGSFDAFRKIMASEGFKGLYKGFGPAMGRSVPANAACFLAYEMTRSALG | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g02041 | 297 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 2 | 93 | IPR018108 | - | |
Trre16g02041 | 297 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 208 | 295 | IPR018108 | - | |
Trre16g02041 | 297 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 102 | 198 | IPR018108 | - | |
Trre16g02041 | 297 | Pfam | Mitochondrial carrier protein | 102 | 199 | IPR018108 | - | |
Trre16g02041 | 297 | Pfam | Mitochondrial carrier protein | 4 | 94 | IPR018108 | - | |
Trre16g02041 | 297 | Pfam | Mitochondrial carrier protein | 214 | 296 | IPR018108 | - | |
Trre16g02041 | 297 | SUPERFAMILY | Mitochondrial carrier | 3 | 290 | IPR023395 | - | |
Trre16g02041 | 297 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 4 | 296 | - | - | |
Trre16g02041 | 297 | FunFam | mitochondrial carnitine/acylcarnitine carrier-like protein | 2 | 296 | - | - | |
Trre16g02041 | 297 | Gene3D | Mitochondrial carrier domain | 99 | 297 | IPR023395 | - | |
Trre16g02041 | 297 | Gene3D | Mitochondrial carrier domain | 2 | 98 | IPR023395 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g02041 | Trre-Chr16 | 16341159 | 16342618 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g02041 | 22 | 296 | Antiporters | AT1G79900 | 33.929 | 6.11e-43 | 147 |